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Yanaka, T.

Publications and source records attributed to Yanaka, T..

2 recordsLinked to original sources

Cell viability is dominated by quantum effects

Quantum tunneling is a phenomenon in which small quantum particles pass through a reaction energy barrier, as if they were passing through a tunnel opened in the barrier. In this study, we analyzed the involvement of the quantum tunneling effect in enzymatic chemical reactions involving hydrolysis in vitro, by monitoring the kinetic isotope effects due to hydrogen isotopes and their temperature dependence as indicators. The results demonstrated that the quantum tunneling effect is involved in deacetylation, DNA cleavage, and protein cleavage reactions. These related reactions were also examined in terms of their effects on cells, which revealed that the quantum effect is even involved in cell survival, including the almost complete inhibition of DNA homologous recombinational repair. One-Sentence SummaryDue to quantum effects in numerous enzymatic reactions mediated by hydrolysis, heavy water significantly impacts biological outcomes in cells.

biophysics↗

Quantum effects on histone deacetylation and cellular transcription

The question of whether physical phenomena at a quantum level significantly impact aspects of macroscopic life has long remained unanswered. Histone modification by acetylation regulates the transcriptional activity of genes, and thereby broadly impacts cellular metabolism. In chemical reactions, the quantum tunneling effect is a phenomenon in which a small quantum particle of the reactant can pass through the potential energy barrier, even if it does not have sufficient energy to overcome the barrier. Here, we demonstrated that quantum effects are involved in the enzymatic reaction of histone deacetylation, by monitoring kinetic isotope effects due to hydrogen isotopes of water molecules and their temperature dependence as indicators. Due to the kinetic isotope effects associated with the quantum effects, the reaction rate balance between histone acetylation and deacetylation in cells was altered with heavy water, which changed epigenetic transcription regulation in the cells. Thus, microscopic quantum mechanisms exist in histone deacetylation, thereby broadly impacting macroscopic life phenomena through epigenetic regulation. TeaserQuantum effects in enzymatic reaction of histone deacetylation latently influence life phenomena through epigenetic regulation.

biophysics↗