bioRxiv Science⌕ Search

Biology subjects

Williams, C. F.

Publications and source records attributed to Williams, C. F..

2 recordsLinked to original sources

Phylogenetic patterns over sixty-five years of vegetation change across a montane elevation gradient

Phylogenetic diversity is an important axis of biodiversity associated with ecosystem stability and productivity. However, climate change will threaten phylogenetic diversity when extinctions are phylogenetically clustered. Despite the importance of phylogenetic diversity for current and future ecosystems, and the potential unique insights it offers into communities, few studies have quantified its long-term changes. Here, we leverage a dataset spanning approximately 65 years and 1500 m of elevation in the Colorado Rocky Mountains to test for changes in phylogenetic diversity in angiosperm communities. We included four community types (sagebrush, spruce-fir, upland-herb, alpine), which vary in the direction and magnitude of changes in species richness over this period. We tested whether individual species responses to climate change could be predicted by phylogeny, including changes to abundance, constancy (% of sites occupied), and elevational range. We did not find phylogenetic signal in abundance change in any community, but we did find phylogenetic signal in both constancy shifts in alpine and elevational shifts in sagebrush communities. We then tested for changes in phylogenetic diversity across time for each community type. We found that phylogenetic diversity changed in the same direction as species richness in the sagebrush community, where both declined, and in the upland-herb, where both increased, with important roles for both species gains and losses in community phylogenetic composition. The alpine community did not change in phylogenetic diversity, although richness declined, while the spruce-fir community increased in phylogenetic diversity but did not change in richness, emphasizing the potential for changes in different aspects of diversity to be decoupled. Our work highlights that the impacts of climate change vary across communities, and that phylogeny is shaping changes in certain systems. Given the importance of phylogenetic diversity to ecosystem function, long term studies are essential for understanding how climate change impacts phylogenetic diversity in distinct community types with unique responses to climate change.

ecology↗

Agriculturally sourced multidrug-resistant Escherichia coli for use as control strains

The environment plays a crucial role in the spread of antibiotic resistance, however environmental surveillance efforts lag far behind clinical surveillance. Natural and human- impacted soil and water are considered major sources of antibiotic resistance in medical and veterinary diagnostics, and the lack of environmental and agricultural surveillance data hinders efforts to assess management impacts or estimate risk. Here we introduce two agriculturally sourced, fully characterized, and genetically sequenced control strains for use in surveillance of extended-spectrum {beta}-lactamase producing (ESBL) and tetracycline-resistant Escherichia coli in the environment, available via publicly accessible culture collections. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=122 SRC="FIGDIR/small/641915v1_ufig1.gif" ALT="Figure 1"> View larger version (29K): org.highwire.dtl.DTLVardef@34cf46org.highwire.dtl.DTLVardef@11403f3org.highwire.dtl.DTLVardef@10f5da3org.highwire.dtl.DTLVardef@1ccb879_HPS_FORMAT_FIGEXP M_FIG C_FIG

microbiology↗