Biology subjects

Watson, J. R.

Publications and source records attributed to Watson, J. R..

6 recordsLinked to original sources

bioRxiv2025

Long-lasting Avoidance Induced by Repeated Stimulation of the Rostromedial Tegmental Nucleus

Adaptive decision-making requires the ability to weigh the relative costs versus the benefits of our actions and to flexibly respond to changing environmental contingencies. While midbrain dopamine (DA) has been a major focus of study for its role in associative learning, motivation, and reward seeking, far less is known regarding the contribution of inhibitory dopamine inputs in promoting behavioral inhibition and avoidance learning. The rostromedial tegmental nucleus (RMTg) sends dense GABAergic projections to DA neurons in the ventral tegmental area (VTA) and mounting evidence suggests the RMTg-VTA circuit is required to suppress reward seeking under punishment, but it remains unclear whether stimulation of this pathway is sufficient to drive learning and promote shifts in cost-benefit decisions. To test this, we developed two separate tasks of passive and active avoidance in rats where lever pressing for food reward was associated with repeated contingent optogenetic stimulation of the RMTg-VTA pathway. In a one-lever fixed ratio 5 food-seeking task, we found that pairing RMTg-VTA stimulation with reward delivery caused a robust, yet transient suppression of reward seeking that quickly returned to baseline after contingent stimulation ceased. When given an alternative reward choice, however, RMTg-VTA stimulation caused a rapid and enduring shift in subjective choice leading to persistent and selective avoidance of the stimulation-paired reward. These findings support a multifaceted role for the RMTg-VTA pathway in learning and decision-making and provide key insights into the neural mechanisms underlying behavioral avoidance and maladaptive reward seeking.

neuroscience↗

bioRxiv2023

Pumping the brakes: Rostromedial tegmental inhibition of compulsive cocaine seeking

Addiction is marked by aberrant decision-making and an inability to suppress inappropriate and often dangerous behaviors. We previously demonstrated that inactivation of the rostromedial tegmental nucleus (RMTg) in rats causes persistent food seeking despite impending aversive footshock, an effect strikingly similar to the punishment resistance observed in people with a history of protracted drug use [1]. Here, we extend these studies to demonstrate chemogenetic silencing of RMTg axonal projections to the ventral tegmental area (VTA) (RMTg{lozenge}VTA pathway) causes rats to endure significantly more footshock to receive cocaine infusions. To further test whether activation of this circuit is sufficient to suppress reward seeking in the absence of an overtly aversive stimulus, we used temporally specific optogenetic stimulation of the RMTg{lozenge}VTA pathway as a "punisher" in place of footshock following lever pressing for either food or cocaine reward. While optical stimulation of the RMTg{lozenge}VTA pathway robustly suppressed lever pressing for food, we found that stimulation of this circuit had only modest effects on suppressing responding for cocaine infusions. Even though optical RMTg{lozenge}VTA stimulation was not particularly effective at reducing ongoing cocaine use, this experience nevertheless had long-lasting consequences, as reinstatement of drug seeking in response to cocaine-associated cues was profoundly suppressed when tested nearly two weeks later. These results suggest the RMTg may serve as a useful target for producing enduring reductions in drug craving, particularly during periods of abstinence from drug use.

neuroscience↗

bioRxiv2020

Unsupervised manifold learning of collective behavior

Collective behavior is an emergent property of numerous complex systems, from financial markets to cancer cells to predator-prey ecological systems. Characterizing modes of collective behavior is often done through human observation, training generative models, or other supervised learning techniques. Each of these cases requires knowledge of and a method for characterizing the macro-state(s) of the system. This presents a challenge for studying novel systems where there may be little prior knowledge. Here, we present a new unsupervised method of detecting emergent behavior in complex systems, and discerning between distinct collective behaviors. We require only metrics, d(1), d(2), defined on the set of agents, X, which measure agents nearness in variables of interest. We apply the method of diffusion maps to the systems (X, d(i)) to recover efficient embeddings of their interaction networks. Comparing these geometries, we formulate a measure of similarity between two networks, called the map alignment statistic (MAS). A large MAS is evidence that the two networks are codetermined in some fashion, indicating an emergent relationship between the metrics d(1) and d(2). Additionally, the form of the macro-scale organization is encoded in the covariances among the two sets of diffusion map components. Using these covariances we discern between different modes of collective behavior in a data-driven, unsupervised manner. This method is demonstrated on empirical fish schooling data. We show that our state classification subdivides the known behaviors of the school in a meaningful manner, leading to a finer description of the systems behavior. Author summaryMany complex systems in society and nature exhibit collective behavior where individuals local interactions lead to system-wide organization. One challenge we face today is to identify and characterize these emergent behaviors, and here we have developed a new method for analyzing data from individuals, to detect when a given complex system is exhibiting system-wide organization. Importantly, our approach requires no prior knowledge of the fashion in which the collective behavior arises, or the macro-scale variables in which it manifests. We apply the new method to an agent-based model and empirical observations of fish schooling. While we have demonstrated the utility of our approach to biological systems, it can be applied widely to financial, medical, and technological systems for example.

bioinformatics↗

bioRxiv2020

Low light levels increase avoidance behaviour of diurnal fish species: Implications for road culverts

Inadequately designed culverts are known to pose hydraulic barriers to fish passage, but they may also be behavioural barriers if they adversely affect light levels within them. To test this, we performed a choice experiment and quantified the amount of time individuals of four Australian fish species spent in darkened and illuminated areas of an experimental swimming fume. Behavioural responses were reflective of the species diel activity patterns; diurnal species preferred illuminated regions, while nocturnal species preferred the darkened region. We then determined a threshold light level of only ~100-200 lux (c.f. midday sunlight ~100,000 lux) was required to overcome the behavioural barrier in ~ 70% of the diurnal fish tested. Placing these threshold values into field context, 100% of culverts sampled recorded inadequate light levels. Attention is required to better understand the impacts of low light levels in culverts on fish passage and to prioritise restoration.

zoology↗

bioRxiv2019

Swimming performance traits of twenty-one Australian fish species: a fish passage management tool for use in modified freshwater systems

Freshwater ecosystems have been severely fragmented by artificial in-stream structures designed to manage water for human use. Significant efforts have been made to reconnect freshwater systems for fish movement, through the design and installation of dedicated fish passage structures (fishways) and by incorporating fish-sensitive design features into conventional infrastructure (e.g. culverts). Key to the success of these structures is making sure that the water velocities within them do not exceed the swimming capacities of the local fish species. Swimming performance data is scarce for Australian fish, which have a reduced swimming capacity when compared to many North American and European species. To help close this knowledge gap and assist fisheries management and civil engineering, we report the swimming performance capacities of twenty-one small-bodied fish and juveniles (< 10 cm) of large bodied species native to Australia as measured by critical swimming speed (Ucrit) and burst swimming speed (Usprint) in a recirculating flume. This data is complemented by endurance swim trials in a 12-meter hydraulic flume channel, and by measures of flume traverse success. Building on the utility of this dataset, we used a panel of morphological, behavioural and ecological traits to first assess their relative contributions to the observed swimming performance data, and second, to determine if they could be used to predict swimming performance capacity - a useful tool to assist in the management of species of conservation concern where access to swimming performance data may be limited. We found that body length combined with depth station (benthic, pelagic or surface) explained most of the interspecific variation in observed swimming performance data, followed by body shape and tail shape. These three traits were the most effective at predicting swimming performance in a model/unknown fish. This data will assist civil engineers and fisheries managers in Australia to mitigate the impact of in-stream structures on local fish populations.

zoology↗

bioRxiv2018

Utilising the boundary layer to help restore the connectivity of fish habitats and populations

SignificanceHabitat fragmentation is a significant contributor to the worldwide decline of freshwater ecosystem health, the most pervasive cause of which is culverts. Culverts act as a barrier to fish movement, impacting feeding, predator avoidance, spawning, and community structures. Here we show that a common remediation strategy that involves baffles, is detrimental to the successful passage of small bodied and juvenile fish at high velocities. To remedy this widespread problem, we present a novel remediation design that benefits a range of small-bodied species and juvenile fish at the same high velocities, regardless of morphology or ecological niche. The application of this remediation design may be expanded to any smooth surfaced anthropogenic structure, to improve fish passage and restore ecosystem functionality.\n\nAbstractCulverts are a major cause of habitat fragmentation in freshwater ecosystems, are a barrier to fish movement, and are regarded as a significant contributor in the decline of freshwater fish populations globally. To try to address this, various culvert remediation designs have been implemented, including the installation of vertical baffles and the provision of naturalistic (rock) substrates. While remediation strategies generally aim to reduce the velocity of water flowing through the structure, there is often resistance to their use because the resultant reduction in culvert discharge can negatively impact upstream flooding while also resulting in debris clogging and increased culvert maintenance costs. In addition, baffles markedly increase water turbulence that may be detrimental to passage by some fish species or size classes. Here we present some novel remediation designs that exploit the reduced water velocity in boundary layers along the culvert wall to enhance fish passage without significantly compromising discharge capacity. These longitudinal designs produce an expanded reduced velocity zone along the culvert margins that generate minimal turbulence. We show that these novel designs are significantly advantageous to the swimming endurance and traversability for six small-bodied Australian fish species. We also provide data on how and why some culvert baffle designs may impede small-bodied fish passage. This data scales with increasing water velocity, encompassing inter-specific differences in swimming capacity. These results have broad implications for fish community structure and the requirement of juvenile cohort of large-bodied commercially important species where baffles have been implemented to facilitate fish passage.

animal behavior and cognition↗