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Virtanen, S.

Publications and source records attributed to Virtanen, S..

2 recordsLinked to original sources

A Systematic Assessment of Robustness in CNS Safety Pharmacology

Irwin tests are key preclinical study elements for characterizing drug-induced neurological side effects. This multicenter study aimed to assess the robustness of Irwin tests across multinational sites during three stages of protocol harmonization. The projects were part of the EQIPD framework (Enhanced Quality in Preclinical Data, https://quality-preclinical-data.eu/), aiming to increase success rates in transition from preclinical testing to clinical application. Female and male NMRI mice were assigned to one of three groups (vehicle, 0.1 mg/kg MK-801, 0.3 mg/kg MK-801). Irwin scores were assessed at baseline and multiple times following injection of MK-801, a non-competitive NMDA antagonist, using local protocols (stage 1), a shared protocol with harmonized environmental design (stage 2), and fully harmonized Irwin scoring protocols (stage 3). The analysis based on the four functional domains (motor, autonomic, sedation, and excitation) revealed substantial data variability in stages 1 and 2. Although there was still marked overall heterogeneity between sites in stage 3 after complete harmonization of the Irwin scoring scheme, heterogeneity was only moderate within functional domains. When comparing treatment groups vs. vehicle, we found large effect sizes in the motor domain and subtle to moderate effects in the excitation-related and autonomic domain. The pronounced interlaboratory variability in Irwin datasets for the CNS-active compound MK-801 needs to be carefully considered by companies and experimenters when making decisions during drug development. While environmental and general study design had a minor impact, the study suggests that harmonization of parameters and their scoring can limit variability and increase robustness.

neuroscience↗

Reassessing the substrate specificities of the major Staphylococcus aureus peptidoglycan hydrolases lysostaphin and LytM

Orchestrated action of peptidoglycan (PG) synthetases and hydrolases is vital for bacterial growth and viability. Although the function of several PG synthetases and hydrolases is well-understood, the function, regulation, and mechanism of action of PG hydrolases characterized as lysostaphin-like endopeptidases have remained elusive. Many of these M23 family members can hydrolyse glycyl-glycine peptide bonds and show lytic activity against Staphylococcus aureus whose PG contains a pentaglycine bridge, but their exact substrate specificity and hydrolysed bonds are still vaguely determined. In this work, we have employed NMR spectroscopy to study both the substrate specificity and the bond cleavage of the bactericide lysostaphin and the S. aureus PG hydrolase LytM. Yet, we provide substrate-level evidence for the functional role of these enzymes. Indeed, our results show that the substrate specificities of these structurally highly homologous enzymes are similar, but unlike observed earlier both LytM and lysostaphin prefer the D-Ala-Gly cross-linked part of mature peptidoglycan. However, we show that while lysostaphin is genuinely a glycyl-glycine hydrolase, LytM can also act as a D-alanyl-glycine endopeptidase.

biochemistry↗