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Viladomat, M.

Publications and source records attributed to Viladomat, M..

2 recordsLinked to original sources

Metagenomic insight into taxonomic composition, environmental filtering, and functional redundancy for shaping worldwide modern microbial mats

Although microbial mats are considered relictual communities that are nowadays mostly constrained in their distribution by predation and phosphorus availability, they are still found in a wide range of environmental conditions. Their ancestral history, geographical isolation, stratified community composition and interspecies dynamics make them an interesting model to study community ecological processes and concepts. In this study, we analyzed different metagenomic datasets from worldwide modern microbial mats to compare community structure and functions. We found significant differentiation in both alpha and beta diversity of taxonomic and functional categories without significant correlation with temperature and pH. Differences depended more on the presence of very highly abundant cyanobacteria and some generalist microorganisms. Our results suggest that there is more than just Grinnellian niche dynamics in the determination of microbial mat community assembly, opening the hypothesis of interactions as the driver behind these ancient communities. We also discuss the influence of niche dynamics and environmental filtering in the community assembly of microbial mats.

ecology↗

Ecological relevance of abundant and rare taxa in a high-diverse elastic hypersaline microbial mat, using a small-scale sampling

We evaluated the microbial diversity and metabolome profile of an uncommon hypersaline elastic microbial mat from Cuatro Cienegas Basin (CCB) in the Chihuahuan Desert of Coahuila, Mexico. We collected ten samples on a small scale transect (1.5-meters) and described its microbial diversity through NGS-based ITS and 16S rDNA gene sequencing. A very low number of taxa comprised a considerable proportion of the mat and were shared across all sampling points, whereas the rare biosphere was more phylogenetically diverse (Faiths Phylogenetic Diversity (FPD) index) and phylogenetically disperse (using a null model distribution of Phylogenetic Species Clustering (nmdPSC)) than the abundant (high read count) taxa for both analyzed libraries. We also found a distinctive metabolome profile for each sample and were able to tentatively annotate several classes of compounds with relevant biological properties.

microbiology↗