Varghese, K. | bioRxiv Science

bioRxiv2025

An Integrated Decarbonising Approach to Mitigate Methane Emissions and Enhance Productivity in Rice Cultivation

Flooded rice paddies contribute approximately 12% of global anthropogenic methane emissions, accounting for 1.5% of the total warming effect from all greenhouse gases. With the rising global demand for rice due to population growth, the need for effective methane mitigation strategies in rice cultivation is increasingly critical. This study investigates the combined impact of irrigation methods, fertiliser combinations, and varietal differences on productivity, water use and methane emissions in rice. Field trials were conducted across five land parcels covering 8 Ha in the Sathyamangalam region of Tamil Nadu, India, from October 2024 to January 2025. Results revealed that drip irrigation significantly reduced seasonal methane emissions by up to 68% (128 kg/ha/season) compared to continuous flood irrigation (402.32 kg/ha/season) offering a sustainable solution to address climate change. Furthermore, our modified package of practices coupled with tailored fertiliser combination, led to a 28% reduction in methane emissions (222 kg/ha/season) relative to continuous flooding methods used by the farmers in the region (309 kg/ha/season). Methane emission differences of up to 23.8% were also evident across rice varieties ADT-45 (229.7 kg/ha/season and BPT-5204 (301.7 kg/ha/season) for. Although flood irrigation yielded a 5-6% higher grain productivity than drip irrigation, the TLL fertiliser package under flood irrigation still provided distinct benefits with a yield increase of 5.4%. Notably, water usage under drip irrigation was 42.5% lower on average across the five locations, with minimal impact on yield, resulting in a marked improvement in water use efficiency (0.62 kg.m-3 under drip vs. 0.39 kg.m-3 under flood irrigation). Our findings highlight the value of integrating modern irrigation techniques, optimizing fertiliser management, and appropriate varietal selection with higher environmental sustainability and improved farm productivity to mitigate climate impact in rice cultivation.

plant biology↗

bioRxiv2019

Neuropilin 2 signaling mediates corticostriatal transmission, spine maintenance, and goal-directed learning in mice

The striatum represents the main input structure of the basal ganglia, receiving massive excitatory input from the cortex and the thalamus. The development and maintenance of cortical input to the striatum is crucial for all striatal function including many forms of sensorimotor integration, learning and action control. The molecular mechanisms regulating the development and maintenance of corticostriatal synaptic transmission are unclear. Here we show that the guidance cue, Semaphorin 3F and its receptor Neuropilin 2 (Nrp2), influence dendritic spine maintenance, corticostriatal short-term plasticity, and learning in adult male and female mice. We found that Nrp2 is enriched in adult layer V pyramidal neurons, corticostriatal terminals, and in developing and adult striatal spiny projection neurons (SPNs). Loss of Nrp2 increases SPN excitability and spine number, reduces short-term facilitation at corticostriatal synapses, and impairs goal-directed learning in an instrumental task. Acute deletion of Nrp2 selectively in adult layer V cortical neurons produces a similar increase in the number of dendritic spines and presynaptic modifications at the corticostriatal synapse in the Nrp2-/- mouse, but does not affect the intrinsic excitability of SPNs. Furthermore conditional loss of Nrp2 impairs sensorimotor learning on the accelerating rotarod without affecting goal-directed instrumental learning. Collectively, our results identify Nrp2 signaling as essential for the development and maintenance of the corticostriatal pathway and may shed novel insights on neurodevelopmental disorders linked to the corticostriatal pathway and semaphorin signaling.\n\nSignificance StatementThe corticostriatal pathway controls sensorimotor, learning and action control behaviors and its dysregulation is linked to neurodevelopmental disorders, such as autism spectrum disorder (ASD). Here we demonstrate that neuropilin 2 (Nrp2), a receptor for the axon-guidance cue semaphorin 3F, has important and previously unappreciated functions in the development and adult maintenance of dendritic spines on striatal spiny projection neurons (SPNs), corticostriatal short-term plasticity, intrinsic physiological properties of SPNs and learning in mice. Our findings, coupled with Nrp2s association with ASD in human populations, suggest that Nrp2 may play an important role in ASD pathophysiology. Overall, our work demonstrates Nrp2 as a key regulator of corticostriatal development, maintenance and function, and may lead to better understanding of neurodevelopmental disease mechanisms.

neuroscience↗