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Torda, G.

Publications and source records attributed to Torda, G..

2 recordsLinked to original sources

Drivers of adaptive capacity in wild populations: implications for genetic interventions

The unprecedented rate of environmental change in the Anthropocene poses evolutionary challenges for wild populations globally. Active human interventions are being increasingly considered to accelerate natural adaptive processes. Evolutionary models can evaluate how species may fare under future climate, elucidate which evolutionary processes are critical to rapid adaptation, and how active interventions may influence fitness trajectories of organisms. Here we use polygenic metapopulation adaptation models to quantify the relative importance (effect sizes) of different eco-evolutionary parameters on the rates of adaptation in wild populations i) without active interventions, and ii) under a subset of active interventions. We demonstrate that genetic diversity (heterozygosity, He), population connectivity and the effect size of additive genetic variance are the primary drivers of natural adaptation rates. We quantify the effect sizes of these parameters on population fitness across three proposed assisted evolution scenarios and identify critical thresholds for intervention effectiveness and implementation. Specifically, the interventions tested here were most effective at low levels of genetic diversity in target populations (He < 0.2) and when timed during a cold-to-warm phase of an ENSO-like oscillation. Beneficial levels of connectivity were highly dependent on desired outcomes for the meta-population. We also present a global meta-analysis of genetic diversity in tropical reef-building corals as a case study of how thresholds derived from evolutionary models can be used to guide decision making by managers. We find genetic diversity to be highly variable by coral taxon and region, highlighting how thresholds from evolutionary models can be used in conjunction with empirical data to assess intervention needs and priorities. Finally, we highlight the critical knowledge and data gaps to produce the next suite of applied models for conservation management decision-support.

evolutionary biology

Cryptic diversity masks ecologically distinct coral species on tropical reefs

Coral reefs are the epitome of species diversity, yet the number of described scleractinian coral species, the framework-builders of coral reefs, remains moderate by comparison. DNA sequencing studies are rapidly challenging this notion by exposing a wealth of undescribed diversity, but the evolutionary and ecological significance of this diversity remains largely unclear. Here, we present an annotated genome for one of the most ubiquitous corals in the Indo-Pacific (Pachyseris speciosa), and uncover through a comprehensive genomic and phenotypic assessment that it comprises morphologically indistinguishable, but ecologically divergent cryptic lineages. Demographic modelling based on whole-genome resequencing disproved that morphological crypsis was due to recent divergence, and instead indicated ancient morphological stasis. Although the lineages occur sympatrically across shallow and mesophotic habitats, extensive genotyping using a rapid diagnostic assay revealed differentiation of their ecological distributions. Leveraging "common garden" conditions facilitated by the overlapping distributions, we assessed physiological and quantitative skeletal traits and demonstrated concurrent phenotypic differentiation. Lastly, spawning observations of genotyped colonies highlighted the potential role of temporal reproductive isolation in the limited admixture, with consistent genomic signatures in genes related to morphogenesis and reproduction. Overall, our findings demonstrate how ecologically and phenotypically divergent coral species can evolve despite morphological stasis, and provide new leads into the potential mechanisms facilitating such divergence in sympatry. More broadly, they indicate that our current taxonomic framework for reef-building corals may be scratching the surface of the ecologically relevant diversity on coral reefs, consequently limiting our ability to protect or restore this diversity effectively.

evolutionary biology