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Toral-Perez, S.

Publications and source records attributed to Toral-Perez, S..

3 recordsLinked to original sources

Single kinetochores execute an ordered series of molecular events as the Spindle Assembly Checkpoint is silenced

The Spindle Assembly Checkpoint (SAC) delays anaphase onset until all kinetochores are stably attached to microtubules, thus promoting error-free chromosome segregation. Multiple molecular events are implicated in SAC silencing, including removal of phospho-marks, protein (un)binding, and structural reorganisation of the kinetochore - but we currently lack a quantitative map of how these events unfold through time. Here, we use the levels of the checkpoint protein MAD2 to create a pseudo-timeline of SAC silencing at single kinetochores. We demonstrate how silencing proceeds through an ordered series of molecular events where MAD2-Spindly unbinds first and then the KNL1 catalytic platform disassembles, with a pool of active MPS1 retained. Coincidently, the NDC80 ensemble reconfigures in response to high microtubule occupancy. Kinetochores next switch into a mature attachment state that then undergoes gradual further stabilisation through NDC80 tail dephosphorylation. By preventing biorientation, we also define otherwise hidden kinetochore states involved in error correction cycles. This includes a "poised" state which we propose allows for error correction and rapid reactivation of the SAC. These results provide a critical temporal framework for understanding the mechanisms of SAC silencing and error correction at single human kinetochores.

cell biology↗

CelFDrive: Artificial Intelligence assisted microscopy for automated detection of rare events

11.1 SummaryCelFDrive automates high-resolution 3D imaging cells of interest across a variety of fluorescence microscopes, integrating deep learning cell classification from auxiliary low resolution widefield images. CelFDrive enables efficient detection of rare events in large cell populations, such as the onset of cell division, and subsequent rapid switching to 3D imaging modes, increasing the speed for finding cells of interest by an order of magnitude. 1.2 Availability and ImplementationCelFDrive is available freely for academic purposes at the CelFDrive GitHub repository. and can be installed on Windows, macOS or Linux-based machines with relevant conda environments [1]. To interact with microscopy hardware requires additional software; we use SlideBook software from Intelligent Imaging Innovations (3i), but CelFDrive can be deployed with any microscope control software that can interact with a Python environment. Graphical Processing Units (GPUs) are recommended to increase the speed of application but are not required. On 3i systems the software can be deployed with a range of microscopes including their Lattice LightSheet microscope (LLSM) and spinning disk confocal (SDC). 1.3 Contacts.brooks.2@warwick.ac.uk

bioengineering↗

Translational control of furina by an RNA regulon is essential for heart morphogenesis and cardiac valve function

Heart development is a complex process, starting from specification of cardiac precursors and formation of a linear tube to gradual progression to a functional beating organ. For normal heart development, many processes, including asymmetric positioning of the heart along the left-right (L/R) axis, cardiac growth, and cardiac valve morphogenesis must be completed successfully. Although heart development has been studied extensively, the mechanisms that control heart morphogenesis and valve formation are not fully understood. The pro-convertase FurinA is a key protein that functions in heart development in many vertebrates including zebrafish. How FurinA activity is regulated during heart development is not known. Through computational analysis of the zebrafish transcriptome, we identified a short sequence and structure RNA motif in a variant transcript of FurinA harbouring a long 3untranslated region (3UTR). The alternative 3UTR furina isoform is expressed at embryonic stages preceding organ positioning. Reporter localization and RNA-binding assays show that the furina 3UTR forms complexes with the conserved RNA-binding protein and translational repressor Ybx1. Conditional mutant zebrafish embryos affecting ybx1 show premature and increased Furin reporter protein expression, abnormal cardiac morphogenesis and heart looping defects. Our mutant ybx1 hearts have an expanded atrioventricular canal, abnormal sino-atrial valves and many mutant embryos show retrograde blood flow from the ventricle to the atrium. This is similar to human heart valve regurgitation patients. Our findings show an essential function for the 3UTR element/Ybx1 regulon in translational repression of FurinA, revealing a new upstream regulatory mechanism that controls embryonic heart development, and demonstrates the ybx1 mutant as a model to study cardiac valve development and function.

developmental biology↗