Biology subjects

Tarpy, D. R.

Publications and source records attributed to Tarpy, D. R..

14 recordsLinked to original sources

bioRxiv2025

Virus infection of honey bee queens alters lipid profiles and indirectly suppresses a retinue pheromone component via reducing ovary mass

Virus infections reduce honey bee (Apis mellifera) ovary mass (in part due to resource-allocation trade-offs with immunity) and are linked to the presence of supersedure cells in colonies, indicating that workers are attempting to replace their queen. Pheromones, lipids, and lipid transport proteins could mediate relationships among virus infection, ovary mass, and supersedure. When we infected honey bee queens in the laboratory and profiled their queen retinue pheromone (QRP) components from head extracts, we found that virus infections specifically reduced the QRP component methyl oleate. Data from an observational field study were consistent with this pattern. Lipidomics analysis of the same extracts suggests that virus infection decreases triacylglycerol abundances (major sources of stored energy). Reducing ovary mass via laying restriction was sufficient to lower methyl oleate abundance [-] suggesting that virus infection reduces methyl oleate indirectly via ovary effects [-] but was insufficient to reduce abundance of most triacylglycerols or stimulate immune effector expression. Abundance of circulating apolipophorin-III, a lipid transporter and putative potentiator of immune effectors, was lower in queens with restricted laying, suggesting that its expression may be controlled by nutrient availability while its immune-stimulating capacity is governed by other mechanisms. Prior research has shown that queen pheromone blends lacking methyl oleate are less attractive to workers; therefore, diminishing methyl oleate could result in a less desirable pheromone bouquet and possibly stimulate supersedure. The mechanism of methyl oleate reduction is yet to be determined, but is clearly tied to ovary size and possibly resource availability or mobilization.

physiology↗

bioRxiv2025

Western red cedar (Thuja plicata) beehives have no impact on honey bee (Apis mellifera) overwintering colony survival or detoxification enzyme expression

In North America, wooden honey bee hives are most often constructed from pine, but some companies also produce and sell boxes made of western red cedar (Thuja plicata) as a result of its local availability and desirable properties. However, there is debate within the beekeeping community about whether cedar is a safe hive material for bees, since resins within the wood are known to be insecticidal or insect deterrents. There is very little empirical evidence to support or refute these arguments. Here, we recorded health metrics of honey bee nucleus colonies hived in western red cedar and pine boxes (n = 10 each) to determine if the type of wood affects colony outcomes. Colonies were produced and introduced into these boxes in late July, with monitoring continued until the following spring. We found no significant differences in adult bee populations, brood areas, or Varroa mite prevalence among colonies hived in cedar versus pine boxes at either the end of summer (September 1st) or spring (April 1st) assessments. Overwintering survival was identical in the two groups at 90%. Hemolymph detoxification enzyme expression differed strongly between callow (day-old) workers and foragers but did not differ with hive material. Overall, we did not find evidence that hiving honey bee colonies in boxes constructed of western red cedar has any negative or positive effect on bee physiology or colony outcomes.

physiology↗

bioRxiv2024

Honey bee egg composition changes seasonally and after acute maternal virus infection

Honey bee (Apis mellifera) colonies depend on the reproductive output of their queens, which in turn is contingent on the care provided by worker bees. Viral infections in queens can compromise reproductive output, while worker infections can inhibit the successful functioning of a colony and its ability to care for the queen. Transgenerational immune priming (TGIP) occurs when queens transfer immune-related compounds or immune elicitors to their offspring, enhancing the ability of subsequent generations to resist infections. These maternal effects on offspring could positively impact colony health and resilience to viral infections, but little is currently known about TGIP for viruses. In this study, we investigate how viral infections affect the proteomic composition of eggs laid by virus-challenged queens (injected with a mixture of black queen cell virus and deformed wing virus B), both in controlled experimental settings and natural field conditions. Our results showed that virus-challenged queens upregulated immune effectors in their eggs and ovaries. In contrast, naturally infected queens from field surveys did not; there were no significant differences in egg protein, lipid, or metabolite composition related to maternal viral load or ovary size. However, egg collection date strongly influenced egg composition, likely reflecting seasonal variations in pollen resources. These findings highlight that while viral infections can induce transgenerational effects on egg proteomes under short-term experimental conditions, such effects are less apparent in natural settings and can be overshadowed by seasonal and other ecological factors.

zoology↗

bioRxiv2024

Population origin, body mass, and viral infections influence drone honey bee (Apis mellifera) heat tolerance

Extreme temperatures associated with climate change are expected to impact the physiology and fertility of a variety of insects, including honey bees. Most previous work has focused on female honey bees, and comparatively little research has investigated how heat exposure affects males (drones). To address this gap, we tested how body mass, viral infections, Africanization, and geographic origin (including stocks from Australia, California, and Ukraine as well as diverse locations within British Columbia, Canada) influenced drone and sperm heat tolerance. We found that individual body size was highly influential, with heavier drones being more likely to survive a heat challenge than smaller drones. Drones originating from feral colonies in Southern California (which are enriched for African genetics) were also more likely to survive a heat challenge than drones originating from commercially-supplied Californian stock. We found no association between drone mass and thermal tolerance of sperm over time in an in vitro challenge assay, but experimental viral infection decreased the heat tolerance of sperm. Overall, there is ample variation in sperm heat tolerance, with sperm from some groups displaying remarkable heat resilience and sperm from others being highly sensitive, with additional factors influencing heat tolerance of the drones themselves.

physiology↗

bioRxiv2024

Common viral infections inhibit egg laying in honey bee queens and are linked to premature supersedure

With their long lives and extreme reproductive output, social insect queens have escaped the classic trade-off between fecundity and lifespan but evidence for a trade-off between fecundity and immunity has been inconclusive. This is in part because pathogenic effects are seldom decoupled from effects of immune induction. We conducted parallel, blind virus infection experiments in the laboratory and in the field to interrogate the idea of a reproductive immunity trade-off and better understand how these ubiquitous honey bee stressors affect queen health. We found that queens injected with infectious virus had smaller ovaries and were less likely to recommence egg-laying than controls, while queens injected with UV-inactivated virus displayed an intermediate phenotype. In the field, heavily infected queens had smaller ovaries and infection was a meaningful predictor of whether supersedure cells were observed in the colony. Immune responses in queens receiving live virus were similar to queens receiving inactivated virus, and several of the same immune proteins were negatively associated with ovary mass in the field. This work solidifies the relationship between virus infection and symptoms associated with queen failure and suggests that a reproductive-immunity trade-off is partially, but not wholly responsible for these effects.

zoology↗

bioRxiv2023

No trade-off between ovary activation and immune protein expression in female bumble bees (Bombus impatiens)

Evidence for a trade-off between reproduction and immunity has manifested in many animal species, including social insects. However, investigations in social insect queens present a conundrum: new gynes of many social hymenopterans, such as bumble bees and ants, must first mate, then transition from being solitary to social as they establish their nests, thus experiencing confounding shifts in environmental conditions. Worker bumble bees offer an opportunity to investigate patterns of immune protein expression associated with ovary activation while minimizing extraneous environmental factors and genetic differences. Here, we use proteomics to interrogate the patterns of immune protein expression of female bumble bees (Bombus impatiens) by 1) sampling queens at different stages of their life cycle, then 2) by sampling workers with different degrees of ovary activation. Patterns of immune protein expression in the hemolymph of queens are consistent with a reproduction-immunity trade-off, but equivalent samples from workers are not. This brings into question whether queen bumble bees really experience a reproduction-immunity trade-off, or if patterns of immune protein expression may actually be due to the selective pressure of the different environmental conditions they are exposed to during their life cycle.

physiology↗

bioRxiv2023

Metagenomic analysis of the honey bee queen microbiome reveals low bacterial diversity and Caudoviricetes phages

In eusocial insects, the health of the queens - the colony founders and sole reproductive females - is a primary determinant for colony success. Queen failure in the honey bee Apis mellifera, for example, is a major concern of beekeepers that annually suffer with colony losses, necessitating a greater knowledge of queen health. Several studies on the microbiome of honey bees have characterized its diversity and shown its importance for the health of worker bees, the female non-reproductive caste. However, the microbiome of workers differs from that of queens, which in comparison is still poorly studied. Thus, direct investigations of the queen microbiome are required to understand colony-level microbiome assembly, functional roles, and evolution. Here we used metagenomics to comprehensively characterize the honey bee queen microbiome. Comparing samples from different geographic locations and breeder sources, we show that the microbiome of queens is mostly shaped by the environment experienced since early life, and is predicted to play roles in breakdown of the diet, and protection from pathogens and xenobiotics. We also reveal the microbiome of queens comprises only four core bacterial species, Apilactobacillus kunkeei, Lactobacillus apis, Bombella apis and Commensalibacter sp. Interestingly, in addition to bacteria, we show that bacteriophages infect the queen microbiome, for which Lactobacillaceae are predicted to be the main reservoirs. Together, our results provide the basis to understand the honey bee colony microbiome assemblage, can guide improvements in queen rearing processes, and highlight the importance of bacteriophages for queen microbiome health and microbiome homeostasis in eusocial insects. ImportanceThe queen caste plays a central role for colony success in eusocial insects, as queens lay eggs, and regulate colony behavior and development. Queen failure can cause colonies to collapse, which is one of the major concerns of beekeepers. Thus, understanding of the biology behind the queens health is a pressing issue. Previous studies have shown the bee microbiome plays an important role in worker bee health, but little is known about the queen microbiome and its function in vivo. Here, we characterized the queen microbiome identifying for the first time present species and their putative functions. We show that the queen microbiome have predicted nutritional and protective roles in queen association, and comprises only four consistently present bacterial species. Additionally, we bring to attention the spread of phages in the queen microbiome, which increased in abundance in failing queens and may impact the fate of the colony.

genomics↗

bioRxiv2022

Social Regulation of Egg Size Plasticity in the Honey Bee is Mediated by Cytoskeleton Organizer Rho1

Egg size plasticity represents an adaptive reproductive strategy in numerous organisms, including the honey bee, Apis mellifera. However, the proximate causation of this plasticity and egg size in general is unknown. We show that honey bee queens predictably and reversibly adjust egg size in response to their colony size and that this plasticity is an active response to the queens perception of colony size instead of a consequence of egg laying rate. The egg size increase involves changes of 290 ovarian proteins, mostly related to increased energy metabolism, protein transport, and cytoskeleton functions. Spatio-temporal expression analysis of the small GTPase Rho1 indicates its central role in egg size regulation, which we confirm by RNAi-mediated gene knock-down and expression analyses. The molecular adjustments that promote maternal investment of honey bee queens in response to their social environment thus reveal a novel mechanism of egg size regulation.

evolutionary biology↗

bioRxiv2021

Cryptic costs of viral infection in a model social insect

Declining insect populations emphasize the importance of understanding the drivers underlying reductions in insect fitness. Here, we investigated viruses as a threat to social insect reproduction, using honey bees as a model species. We report that in a sample of N = 93 honey bee (Apis mellifera) queens from nine beekeeping operations across a wide geographic range, high levels of natural viral infection are associated with decreased ovary mass. We confirmed this finding in an independent sample of N = 54 queens. Failed (poor quality) queens displayed higher levels of viral infection, reduced sperm viability, smaller ovaries, and altered ovary protein composition compared to healthy queens. We experimentally infected queens with Israeli acute paralysis virus (IAPV) and found that the ovary masses of IAPV-injected queens were significantly smaller than control queens, demonstrating a causal relationship between viral infection and ovary size. Queens injected with IAPV also had significantly lower expression of vitellogenin, the main source of nutrition deposited into developing oocytes, and higher levels of heat-shock proteins (HSPs), which are part of the honey bees antiviral response. This work together shows that viral infections occurring naturally in the field are compromising queen reproductive success.

systems biology↗

bioRxiv2021

Honey bee queen health is unaffected by contact exposure to pesticides commonly found in beeswax

Honey bee queen health is crucial for colony health and productivity, and pesticides have been previously associated with queen loss and premature supersedure. Prior research has investigated the effects of indirect pesticide exposure on queens via workers, as well as direct effects on queens during development. However, as adults, queens are in constant contact with wax as they walk on comb and lay eggs; therefore, direct pesticide contact with adult queens is a relevant but seldom investigated exposure route. Here, we conducted laboratory and field experiments to investigate the impacts of topical pesticide exposure on adult queens. We tested dose-response relationships of six pesticides commonly found in wax: coumaphos, tau-fluvalinate, atrazine, 2,4-DMPF, chlorpyriphos, chlorothalonil, and a cocktail of all six, each dosed up to 32 times the concentrations typically found in wax. We found no effect of any treatment on queen mass or sperm viability. Furthermore, none of the 1,568 proteins quantified in the queens fat bodies (a major site of detoxification enzyme production) were differentially expressed. In a field trial with N = 30 queens exposed to either a handling control, a solvent control, or a pesticide cocktail, we again found no impact on queen egg-laying pattern, mass, or emergence mass of daughter workers. Further, of the 3,127 proteins identified in fluid from the spermatheca (sperm storage organ), none were differentially expressed. These experiments consistently show that at realistic exposure levels, pesticides commonly found in wax have no direct impact on queen performance, reproduction, or quality metrics. We suggest that previously reported associations between high levels of pesticide residues in wax and queen failure are most likely driven by indirect effects of worker exposure (either through wax or other hive products) on queen care or queen perception.

pharmacology and toxicology↗

bioRxiv2020

Assessment and comparison of two different methods to extract nucleic acids from individual honey bees

The honey bee is an excellent model system to study behavior ecology, behavioral genetics, and sociogenomics. Nucleic acid based analyses enable a broad scope of research in functional genomics, disease diagnostics, mutant screening, and genetic breeding. Multiple levels of analysis lead to a more comprehensive understanding of the causes of phenotypic variation by integrating genomic variation, transcriptomic profiles, and epigenomic information. One limitation, however, is the sample preparation procedures to obtain high quality DNA and RNA simultaneously, particularly from small amounts of material, such as tissues of individual bees. We demonstrate that it is feasible to perform dual extractions of DNA and RNA from a single individual bee and compare the quality and quantity of the extracted nucleic acids using two different types of methods (column based versus ethanol precipitation). We obtained a higher yield of both DNA and RNA with one of the extraction methods over the other, although the quality of the DNA and RNA was not significantly different between methods. We describe here the first validated method for dual extraction of DNA and RNA specifically from individual honey bees.

molecular biology↗

bioRxiv2020

Trade-offs between sperm viability and immune protein expression in honey bee queens (Apis mellifera)

Queens of many social hymenoptera keep sperm alive within their specialized storage organ, the spermatheca, for years, defying the typical trade-off between lifespan and reproduction. However, whether honey bee queens experience a trade-off between reproduction and immunity is unknown, and the biochemical processes underlying sperm viability are poorly understood. Here, we survey quality metrics and viral loads of honey bee queens from nine genetic sources. Queens rated as failed by beekeepers had lower sperm viability, fewer sperm, and higher levels of SBV and BQCV. Quantitative proteomics on N = 123 spermathecal fluid samples shows, after accounting for sperm count, health status, and apiary effects, five spermathecal fluid proteins significantly correlating with sperm viability: odorant binding protein (OBP)14, lysozyme, serpin 88Ea, artichoke, and heat-shock protein (HSP)10. The significant negative correlation of lysozyme--a conserved immune effector--with sperm viability is consistent with a reproduction vs. immunity trade-off in honey bee queens.

molecular biology↗

bioRxiv2020

Candidate stress biomarkers for queen failure diagnostics

BackgroundQueen failure is a persistent problem in beekeeping operations, but in the absence of overt symptoms it is often difficult, if not impossible, to ascertain the root cause. Stressors like heat-shock, cold-shock, and sublethal pesticide exposure can reduce stored sperm viability and lead to cryptic queen failure. Previously, we suggested candidate protein markers indicating heat-shock in queens, which we investigate further here, and tested new stressors to identify additional candidate protein markers. ResultsWe found that heat-shocking queens for upwards of one hour at 40 {degrees}C was necessary to induce significant changes in the two strongest candidate heat-shock markers, and that relative humidity significantly influenced the degree of activation. In blind heat-shock experiments, we tested the efficiency of these markers at assigning queens to their respective treatment groups and found that one marker was sufficient to correctly assign queens 75% of the time. Finally, we compared cold-shocked queens at 4 {degrees}C and pesticide-exposed queens to controls to identify candidate markers for these additional stressors, and compared relative abundances of all markers to queens designated as healthy and failing by beekeepers. ConclusionsThis work offers some of the first steps towards developing molecular diagnostic tools to aid in determining cryptic causes of queen failure. Further work will be necessary to determine how long after the stress event a markers expression remains changed and how accurate these could be in the field.

biochemistry↗

bioRxiv2019

Queen honey bees combat heat stress-induced loss of stored sperm viability with ATP-independent heat shock proteins

All species need to reproduce to maintain viable populations, but heat stress kills sperm cells across the animal kingdom and rising frequencies of heatwaves are a threat to biodiversity. Honey bees (Apis mellifera) are globally distributed micro-livestock; therefore, they could serve as environmental biomonitors for fertility losses. Here, we found that queens have two potential routes of temperaturestress exposure: within colonies and during routine shipping. Our data suggest that temperatures of 15 to 38{degrees}C are safe for queens at a tolerance threshold of 11.5% loss of sperm viability, which is the viability difference associated with queen failure in the field. Heat shock activates expression of specific stressresponse proteins in the spermatheca, which could serve as molecular biomarkers (indicators) for heat stress. This protein fingerprint may eventually enable surveys for the prevalence of heat-induced loss of sperm viability in diverse landscapes as part of a biomonitoring program.

physiology↗