Biology subjects

Strack, M.

Publications and source records attributed to Strack, M..

4 recordsLinked to original sources

bioRxiv2025

Methanotroph dynamics at landfill cover soil methane emission hotspots

Landfills contribute significant emissions to the global methane cycle, where emission hotspots can account for the majority of methane released. Methanotrophs in landfill cover soils can mitigate these methane emissions, but are constrained by geochemical conditions in the soils and the climate at the landfills location. We sampled cover soils from four Ontario landfills with differing characteristics, including measurements of methane flux, soil methane concentration, and a suite of geochemical variables. Sampling sites were distinguished based on the levels of methane flux. Microbial community diversity and methanotroph dynamics were examined using 16S rRNA gene amplicon sequencing. Sites with high methane emissions showed strong enrichment of methanotrophs, dominated by the genus Methylomicrobium. The distribution of methanotrophs in samples across landfills and sites differed significantly when considering community evenness. Of the environmental factors examined, microbial community diversity correlated most strongly to nitrate and nitrite concentrations. Methanotroph dynamics across different methane exposures and geochemical conditions within landfill cover soils inform the use of designer cover soils and/or methanotroph amendments in efforts toward mitigating methane emissions from landfills.

microbiology↗

bioRxiv2024

Macro-environment strongly interacts with warming in a global analysis of decomposition

Empirical studies worldwide show substantial variability in plant litter decomposition responses to warming, leaving the overall impact of climate change on this process uncertain. We conducted a meta-analysis of 109 experimental warming studies across seven continents, utilizing natural and standardized plant material, to assess the overarching effect of warming on decomposition and identify potential moderating factors. Warming influences decomposition differently across macro-environmental gradients of moisture and temperature. Negative warming effects on decomposition in warmer, low-moisture areas were counterbalanced by the positive, though not significant, warming effects in colder areas, resulting in an overall non-significant effect. We determine that at least 5.2 degrees of warming is required for a significant increase in decomposition. This is particularly relevant given the past decades global warmth in higher latitudes, holding a significant proportion of terrestrial carbon. Low-quality plant litter was more sensitive to warming. Therefore, future vegetation changes toward low-quality, temperature-sensitive plants could increase carbon release and reduce the net supply of stored organic matter in the soil by increasing the decomposition of low-quality litter with warming. Our findings emphasize the connection between warming responses, macro-environment, and litter characteristics, refining predictions of climate changes consequences on key ecosystem processes and its contextual dependencies.

ecology↗

bioRxiv2023

Darkness inhibits autokinase activity of bacterial bathy phytochromes

Bathy phytochromes are a subclass of bacterial biliprotein photoreceptors that carry a biliverdin IX chromophore. In contrast to prototypical phytochromes that adopt a Pr ground state, the Pfr-form is the thermally stable ground state of bathy phytochromes. Although the photobiology of bacterial phytochromes has been extensively studied since their discovery in the late 1990s, our understanding of the signal transduction process to the connected transmitter domains, which are often histidine kinases, remains insufficient. Initiated by the analysis of the bathy phytochrome PaBphP from Pseudomonas aeruginosa, we performed a systematic analysis of five different bathy phytochromes with the aim to derive a general statement on the correlation of photostate and autokinase output. While all proteins adopt different Pr/Pfr-fractions in response to red, blue, and far-red light, only darkness leads to a pure or highly-enriched Pfr-form, directly correlated with the lowest level of autokinase activity. Using this information, we developed a method to quantitatively correlate the autokinase activity of phytochrome samples with well-defined stationary Pr/Pfr-fractions. We demonstrate that the off-state of the phytochromes is the Pfr-form and that different Pr/Pfr-fractions enable the organisms to fine-tune their kinase output in response to a certain light environment. Furthermore, the output response is regulated by the rate of dark reversion, which differs significantly from 5 seconds to 50 minutes half-life. Overall, our study indicates that bathy phytochromes function as sensors of light and darkness, rather than red and far-red light, as originally postulated.

microbiology↗

bioRxiv2021

Graminoids vary in functional traits, carbon dioxide and methane fluxes in a restored peatland: implications for modeling carbon storage

One metric of peatland restoration success is the re-establishment of a carbon sink, yet considerable uncertainty remains around the timescale of carbon sink trajectories. Conditions post-restoration may promote the establishment of vascular plants such as graminoids, often at greater density than would be found in undisturbed peatlands, with consequences for carbon storage. Although graminoid species are often considered as a single plant functional type (PFT) in land-atmosphere models, our understanding of functional variation among graminoid species is limited, particularly in a restoration context. We used a traits-based approach to evaluate graminoid functional variation and to assess whether different graminoid species should be considered a single PFT or multiple types. We tested hypotheses that greenhouse gas fluxes (CO2, CH4) would vary due to differences in plant traits among five graminoid species in a restored peatland in central Alberta, Canada. We further hypothesized that species would form two functionally distinct groupings based on taxonomy (grass, sedge). Differences in gas fluxes among species were primarily driven by variation in leaf physiology related to photosynthetic efficiency and resource-use, and secondarily by plant size. Multivariate analyses did not reveal distinct functional groupings based on taxonomy or environmental preferences. Rather, we identified functional groups defined by continuous plant traits and carbon fluxes that are consistent with ecological strategies related to differences in growth rate, resource-acquisition, and leaf economics. These functional groups displayed larger carbon storage potential than currently-applied graminoid PFTs. Existing PFT designations in peatland models may be more appropriate for pristine or high-latitude systems than those under restoration. Although replacing PFTs with continuous plant traits remains a challenge in peatlands, traits related to leaf physiology and growth rate strategies offer a promising avenue for future applications.

ecology↗