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Stack, J.

Publications and source records attributed to Stack, J..

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Tropomyosin 3.1 Regulates Chondrocyte Cortical F-actin Stability and Homeostasis

Objective: Osteoarthritis is a degenerative joint disease of which the mechanisms and proteins contributing to articular cartilage breakdown have not yet been fully elucidated. In osteoarthritis, chondrocyte F-actin loss coincides with altered chondrocyte homeostasis favoring catabolism. While the loss of F-actin has been implicated as a driver of osteoarthritis progression, the mechanisms by which F-actin is lost and regulates a catabolic shift in gene expression require elucidation. We hypothesized that destabilizing F-actin by targeting inhibition of specific F-actin stabilizer Tropomyosins (Tpms) dysregulates chondrocyte homeostasis through regulation of actin-associated transcription factors, Yes-associated protein (YAP) and Myocardin-related transcription factor A (MRTF). Methods: Using RT-PCR and Sanger sequencing, we determined the expression of Tpm isoforms present in cartilage. We then focused on the regulation of chondrocyte cortical F-actin by the specific Tpm isoform, Tpm3.1. Using confocal imaging for F-actin, we examined the effect of Tpm3.1 knockout in mouse femoral head cartilage and pharmacological inhibition (TR100) of primary bovine chondrocytes. Next, we examined the nuclear translocation of actin-associated regulators, YAP and MRTF, by TPM3.1 inhibition in primary chondrocytes. Finally, we determined the effect of YAP and MRTF inhibition on the regulation of chondrogenic and degradative enzyme gene expression in primary chondrocytes. Results: Our results revealed TPM3.1 is present and localized cortically in mouse and bovine chondrocytes. There was a reduction in cortical F-actin staining in Tpm3.1 knockout mouse femoral head cartilage as well as in primary bovine chondrocytes treated with TR100. In primary chondrocytes, TR100 caused a catabolic shift in mRNA levels. This coincided with a decrease in the nuclear-to-cytoplasmic ratio of both YAP and MRTF in TR100-treated cells. Furthermore, pharmacological inhibition of either YAP or MRTF partially recapitulated the catabolic shift seen in TR100-treated chondrocytes by a reduction of chondrogenic mRNA levels. Conclusion: Collectively, these results provide insight into the regulation of chondrocyte homeostasis by cortical F-actin stability and the downstream mediators of transcription. A greater understanding of the actin-associated molecules that regulate chondrocyte homeostasis in osteoarthritis may lead to novel insights to target disease progression.

cell biology↗

Evolution of supernumerary chromosomes in wheat blast fungal pathogens

A genome of Pyricularia oryzae (synonym Magnaporthe oryzae), the fungus that causes blast disease on diverse grass species, has seven core chromosomes and may contain supernumerary mini-chromosomes. The P. oryzae Triticum (PoT) pathotype is the phylogenetic lineage responsible for devastating epidemics of wheat blast disease. Genomic analysis of wheat blast field isolates from the initial outbreak in 1985 in Brazil through recent field isolates in South America revealed dynamic presence and structure of mini-chromosomes. Two "earliest" field isolates representing founder lineages for the Triticum pathotype contain similar mini-chromosomes. Another PoT founder isolate from 1986 and 37 out of 39 Triticum field isolates collected between 1986 and 1992 lack mini-chromosomes. Mini-chromosomes present in the founder strains each contain two copies of the PWT7 wheat blast avirulence gene, and PWT7 was lost from subsequent early strains through mini-chromosome loss. Almost all PoT field isolates from 2005 to 2020 have regained mini-chromosomes in which PWT7 sequences have been replaced by other sequences. Telomere-to-telomere assemblies of 11 mini-chromosomes identified two major mini-chromosome types in the South American PoT population, and demonstrated significant within-mini-chromosome sequence alterations as well as recombination with other mini-chromosomes or core chromosome ends. Additionally, our data indicate horizontal mini-chromosome transfer between Pyricularia species, resulting in nearly identical genomic fragments shared between P. oryzae and Pyricularia pennisetigena isolates in the PWT4 avirulence gene region. Our genomic analysis depicts the dynamic mini-chromosome compartment in the diverse South American Triticum field population through time, indicating important roles for mini-chromosomes in pathogen adaptation and pathogenicity.

evolutionary biology↗