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Sooter, J. S.

Publications and source records attributed to Sooter, J. S..

6 recordsLinked to original sources

Decomposing the modulation of interactions between neuronal populations

Identifying subpopulations of neurons that interact with each other from simultaneous recordings of populations of many neurons is key for understanding across-brain communication with cellular resolution. Recent work identified communication subspaces, which capture additive interactions between pairs of high-dimensional neural populations through a small number of source and target activity patterns. However, no current method captures how a third, potentially multivariate variable - such as behavioral state or the activity of a third population - modulates these interactions. Here we extend the communication subspace framework by parameterizing modulation as a low-rank tensor. This identifies multiplicative interaction channels (MICs), defined as triplets of source, target, and modulator activity patterns, in which the modulator pattern gates the source-target interaction. We derive MICs as a bilinear perturbation of reduced-rank regression. We develop a hierarchical fitting pipeline and provide a closed-form decomposition that quantifies whether modulation reshapes the modulator-averaged baseline interaction, recruits private dimensions of one population, or opens new interactions. In simulations, MICs reliably recover the presence and geometry of ground-truth modulation even in the high-dimensional, low-sample regime. Applying MICs to simultaneous calcium imaging of prefrontal axons and interneurons in the visual cortex revealed that behavioral state asymmetrically modulates top-down interactions, reconfiguring the patterns of prefrontal projections that interact with a stable set of visual interneuron activity patterns. By providing an efficient and compact characterization of modulatory interactions, MICs enable asking new questions about how potentially high-dimensional variables shape interactions between neural populations.

neuroscience↗

Emergent critical oscillations in motor cortex of Parkinson's patients

The dynamical state of cortical neural activity constrains the complexity of functions it can perform. A marginally stable dynamical state - called criticality - is thought to be beneficial for brain functions that require multiple time scales, broad dynamic range, and large information storage and transmission. A growing body of evidence suggests that criticality is a feature of healthy brain dynamics, but breaks down in certain brain disorders. Here we ask whether Parkinsons disease incurs deviation from criticality compared to healthy controls. We analyze human resting state EEG activity in primary motor cortex. Parkinsons patients exhibit prominent oscillatory brain activity in multiple frequency bands (low delta and high theta) that is not present in controls. Surprisingly, we find that these emergent oscillations are close to criticality, i.e., amplitude fluctuations with approximate temporal scale invariance. We compare traditional signatures of criticality and more principled measurements of proximity to criticality using our new approach based on information theory and temporal renormalization group theory. Our new approach and traditional methods agree, demonstrating that critical dynamics are not always associated with healthy states; Parkinsons disease is associated with the emergence of near-critical oscillations in motor cortex. Author SummaryBrain function is thought to be optimal when its activity is near the border of order and chaos -- a state called criticality. This state is thought to help the brain stay flexible and process information efficiently. We investigate whether Parkinsons disease disrupts this balance like in other diseases and pathologies. Using resting EEG brain activity, we found that people with Parkinsons show strong rhythmic signals not seen in healthy brains, and surprisingly these rhythms are also near the critical state. Using both established and new theoretical tools, we show that critical dynamics can accompany disease, suggesting that being closer to criticality is not always a sign of healthy brain function.

neuroscience↗

Is critical brain dynamics more prevalent than previously thought?

The hypothesis that the brain operates near criticality has far-reaching implications for brain function and is supported by growing experimental evidence. Observations of scale-invariant brain activity agree with this hypothesis, but what about when brain activity is not scale-invariant? Should we reject the criticality hypothesis When power-laws poorly fit the data or when strong oscillations occur (dominated by a specific time scale)? Here we show several ways that criticality can be hidden from traditional data analytic approaches, leading to false negative conclusions. We use a parsimonious high-dimensional model to demonstrate how neural systems may separate different dynamical modes into different subspaces, simultaneously generating non-critical dynamics, critical oscillations, and scale-invariant avalanches. Our results point to a need for new methods capable of revealing hidden criticality and suggest that criticality could be more prevalent than previously thought, hidden in subspaces not readily revealed by standard data analyses. Does the brain operate in a dynamical regime close to a critical phase transition? This question is fundamental; the nature of neural computation is strongly impacted by whether a system is close to or far from criticality [1-5]. Evidence suggesting that the brain operates close to criticality has accumulated at an accelerating pace over the past two decades (a recent meta analysis found 31 reports in 2024 alone [2]). The two most common types of experimental evidence have been based on neuronal avalanche analysis [1, 6, 7] and long-range temporal correlation analysis [8-12]. Both these approaches examine a one-dimensional time series of collective neural activity, averaged over large populations of neurons, seeking temporally-correlated, scale-invariant fluctuations that obey specific scaling laws predicted by theory. In many cases, measurements agree with these predictions; the success and persistence of the criticality hypothesis rests on these cases. However, it is not difficult to find measurements that do not agree, with fluctuations poorly described by power-laws and scaling laws. Another common observation that, naively, seems to contradict criticality is oscillatory brain activity with a particular dominant frequency. At first glance, either the lack of power-laws or the prominence of a dominant oscillatory time scale appear to contradict the criticality hypothesis. What should we conclude from these apparently contradictory observations? Assuming that all the experimental observations are sound and valid, there are two possible explanations, not necessarily mutually exclusive. First, it could be that there are biophysical control parameters constantly in flux in the brain, causing shifts in proximity to criticality. In this scenario, non-scale-invariant data reflect true deviations from criticality and we should conclude that the brain is, at times, closer to and, at other times, further from criticality. This view has been proposed in multiple previous studies and is consistent with substantial experimental evidence [6, 13-19]. However, here we argue that there is an important, but rarely considered, second plausible explanation. It could be that traditional methods for assessing criticality can be fooled. In this case, the system dynamics could be truly critical and scale-invariant, but not visible to traditional methods. We first show why such hidden criticality is plausible considering general mathematical arguments and relevant experimental evidence. Then, we use a parsimonious computational model to demonstrate concrete examples of ground truth scale-invariant critical dynamics that are missed by traditional analyses of population average activity. Moreover, our model shows how critical oscillations, avalanches, and other non-critical modes of dynamics can coexist, by separating each different mode into a distinct low-dimensional subspace. All together, our results suggest that the combination of these various subspaces make up the high-dimensional dynamical system commonly observed in the brain. Our results reconcile multiple, seemingly discrepant, experimental observations and describe prospects for new methods that can reveal hidden criticality.

neuroscience↗

Defining and measuring proximity to criticality

Over the half century since the renormalization group (RG) brought about deep understanding of critical phenomena in condensed matter physics, it has been claimed that diverse social, engineered, astrophysical, and biological systems operate close to criticality. However, these systems do not afford the neat phase diagrams and exquisite control available in condensed matter physics. How can one assess proximity to criticality when control parameters are unknown, difficult to manipulate experimentally, and fluctuating in response to changing environmental or internal conditions? Here we meet this challenge with a rigorous theoretical framework and data-analytic strategy for measuring proximity to criticality from observed system dynamics. We developed a temporal RG, well-suited to commonly measured time series, and an information theoretic quantification of proximity to criticality that is independent of model parameterization. After benchmarking our approach on diverse ground-truth cases, we apply it to recordings of spiking activity in the mammalian brain, addressing a long-standing controversy. We show that brain dynamics shift closer to criticality during wakefulness and shift away during deep sleep.

neuroscience↗

Cortex deviates from criticality during action and deep sleep: a temporal renormalization group approach

The hypothesis that the brain operates near criticality explains observations of complex, often scale-invariant, neural activity. However, the brain is not static, its dynamical state varies depending on what an organism is doing. Neurons often become more synchronized (ordered) during unconsciousness and more desynchronized (disordered) in highly active awake conditions. Are all these states equidistant from criticality; if not, which is closest? The fundamental physics of how systems behave near criticality came from renormalization group (RG) theory, but RG for neural systems remains largely undeveloped. Here we developed a temporal RG (tRG) theory for analysis of typical neuroscience data. We mathematically identified multiple types of criticality (tRG fixed points) and developed tRG-driven data analytic methods to assess proximity to each fixed point based on relatively short time series. Unlike traditional methods for studying criticality in neural systems, our tRG approach allows time-resolved measurements of distance from criticality in experiments at behaviorally relevant timescales. We apply our approach to recordings of spike activity in mouse visual cortex, showing that the relaxed, awake state is closest to criticality. When arousal shifts away from this state - either increasing in more active awake states or decreasing in deep sleep - cortical dynamics deviate from criticality.

neuroscience↗

Low dimensional criticality embedded in high dimensional awake brain dynamics

Whether cortical neurons operate in a strongly or weakly correlated dynamical regime determines fundamental information processing capabilities and has fueled decades of debate. Here we offer a resolution of this debate; we show that two important dynamical regimes, typically considered incompatible, can coexist in the same local cortical circuit by separating them into two different subspaces. In awake mouse motor cortex, we find a low-dimensional subspace with large fluctuations consistent with criticality - a dynamical regime with moderate correlations and multi-scale information capacity and transmission. Orthogonal to this critical subspace, we find a high-dimensional subspace containing a desynchronized dynamical regime, which may optimize input discrimination. The critical subspace is apparent only at long timescales, which explains discrepancies among some previous studies. Using a computational model, we show that the emergence of a low-dimensional critical subspace at large timescale agrees with established theory of critical dynamics. Our results suggest that cortex leverages its high dimensionality to multiplex dynamical regimes across different subspaces. TeaserTemporal coarse-graining reveals a low-dimensional critical subspace coexistent with a desynchronized subspace in awake cortex.

neuroscience↗