Biology subjects

Schell, C. J.

Publications and source records attributed to Schell, C. J..

3 recordsLinked to original sources

bioRxiv2026

Rethink the Sink: Urban cores act as leaky sinks to maintain regional gene flow in coyotes

Urbanization is an accelerating evolutionary force, yet the patterns and drivers of urban gene flow remain largely obscured. This leaves a critical gap in testing the interplay between demographic and genetic models of urban connectivity. Specifically: the urban fragmentation model, where structural barriers restrict gene flow and drive genetic drift; the urban facilitation model, where permeable matrices enhance functional connectivity; and the urban sink hypothesis, a demographic model where high mortality creates unsustainable population sinks. We used high-resolution RAD-capture data to conduct landscape genomics and gene flow analyses to resolve these models and investigate contemporary evolution in urban coyotes (Canis latrans) across the greater Los Angeles, CA, USA metropolitan area. By incorporating fine-scale environmental, social-ecological, and historical variables of the built environment, we rigorously assessed how urban heterogeneity shapes intra-city evolutionary dynamics. We found weak population structure, heavily influenced by family groups. There was extensive landscape permeability and gene flow across the study area including across four major highways. We also identified heavily asymmetric gene flow from exurban source populations into the urban core, supporting the urban sink paradigm. However, rather than acting as a genetic dead-end, the urban matrix showed striking functional heterogeneity: one urban core functioned as a 'genetic sponge,' absorbing unique transient alleles from multiple surrounding sources, and both urban cores operated as permeable 'leaky sinks,' exporting critical gene flow to other populations. Consequently, urban demographic sinks can simultaneously act as vital genetic bridges. Our findings reject a pure urban fragmentation model while demonstrating that demographic sink dynamics and genetic facilitation are not mutually exclusive. This demonstrates that high-turnover urban sinks can buffer regional biodiversity against genetic erosion, highlighting the need to prioritize matrix permeability and inter-patch connectivity in urban conservation strategies.

evolutionary biology↗

bioRxiv2025

Detection of Echinococcus multilocularis in coyotes in Washington State, USA highlights need for increased global wildlife surveillance

Echinococcus multilocularis is a zoonotic cestode that uses canids as definitive hosts and rodents as intermediate hosts. In humans, this parasite is the causative agent of alveolar echinococcosis. Recently, its range has been expanding across the Northern Hemisphere, and it is increasingly detected in wild canids, domestic dogs, and humans across Canada and the United States. While this expansion has been documented in isolated studies across the continent, a lack of routine sampling in wildlife hinders our ability to anticipate and mitigate further spread of E. multilocularis. We confirmed the presence of E. multilocularis in Washington State, USA, using a combination of morphological and molecular techniques across carcasses and field-collected scats of coyotes (Canis latrans), this regions most common wild canid. Morphological identification of adult worms was confirmed by next-generation sequencing. Over a third of all samples tested positive for E. multilocularis when all methodologies were combined. Sequencing revealed a haplotype of E. multilocularis matching a documented haplotype originally of European origin in British Columbia, Canada. Our study provides the first confirmation of E. multilocularis in a wild host on the west coast of the U.S and provides additional haplotype information crucial to tracking the geographical expansion of the parasite. We also provide a new next-generation sequencing primer targeting cestodes of canids. The difference in amplification between intestinal and fecal samples suggests that non-invasive fecal sampling using DNA metabarcoding--a popular method of helminth surveillance --may lead to underestimation of prevalence, hindering control measures. The global significance of these findings extends beyond North America; E. multilocularis is a major public health concern in Europe and Asia, where alveolar echinococcosis is increasingly diagnosed in humans. Our study highlights the urgent need for increased surveillance and improved diagnostic strategies worldwide, particularly in regions with significant human-wildlife contact. Author summaryParasites that are transmitted between wildlife, domestic animals, and people are an important part of global health. One such parasite is Echinococcus multilocularis, a small tapeworm of canids that can cause a severe, life-threatening disease in humans called alveolar echinococcosis. Many wild canid hosts of the parasite, such as coyotes, overlap significantly with domestic dogs, which facilitates transmission to humans. In Europe, Asia, and Arctic regions of North America, E. multilocularis has long been recognized as a major public health problem. In recent decades its range has expanded across the Northern Hemisphere, raising concern. In this study, we discovered E. multilocularis in coyotes in a densely populated area of Washington State, USA -- the first detection of E. multilocularis in a wild host in the region. More than one-third of our coyote samples contained E. multilocularis, confirming that it is widespread in the area. Genetic testing showed that the strain we detected matched one previously found in Canada, originally from Europe. Our findings underscore the importance of monitoring E. multilocularis and other parasites in wildlife so that emerging public health threats can be detected early, reducing risk to people and pets.

ecology↗

bioRxiv2025

Global monitoring of wildlife mortality through participatory science in near-real time

Detection of wildlife mortality events is critical for timely conservation and natural resource management. We present an open-source, web-based decision support tool that queries, aggregates and summarizes participatory science data from iNaturalist to monitor mortality events worldwide. We demonstrate the effectiveness of this approach using four case studies spanning taxonomic, spatial, and temporal scales. In Canada and the United States, high peaks of bird mortality coincided with zoonotic risk during avian influenza outbreaks. Across Latin America, we detected 75 mortality events of critically endangered species. In California, recorded mammal mortality was associated with human infrastructure, including proximity to roads, and to a lesser extent, the human footprint. Mortality of pumas (Puma concolor) was detected across nine countries, highlighting the need for international cooperation to conserve mobile species. Our tool enables resource managers to flag emerging threats and empowers participatory scientists to monitor and integrate mortality records for conservation.

ecology↗