Biology subjects

Santiago Rodriguez

Publications and source records attributed to Santiago Rodriguez.

2 recordsLinked to original sources

bioRxiv2016

Y chromosome and mitochondrial DNA haplogroups across behavioural traits in children from the general population

ObjectiveTo evaluate the association between Y chromosome and mitochondrial DNA haplogroups and a number of sexually-dimorphic behavioural and psychiatric traits.\n\nMethodsThe study sample included 4,211 males and 4,009 females with mitochondrial DNA haplogroups and 4,788 males with Y chromosome haplogroups who are part of the Avon Longitudinal Study of Parents and Children (ALSPAC). Different subsets of these populations were assessed using the Developmental and Well-being Assessment (DAWBA), Strengths and Difficulties Questionnaire (SDQ), SCDC (Social and Communication Disorder Checklist) and Psychotic Like Symptom Interview (PLIKSi) as measures of behavioural and psychiatric traits. Logistic regression was used to measure the association between haplogroups and the traits above.\n\nResultsWe found that the majority of behavioural traits in our cohort differed between males and females. However, Y chromosome and mitochondrial DNA major haplogroups were not associated with any of the variables. In addition, secondary analyses of Y chromosome and mitochondrial DNA subgroups also showed no association.\n\nConclusionY chromosome and mitochondrial DNA haplogroups are not associated with behavioural and psychiatric traits in a sample representative of the UK population.

Genetics↗

bioRxiv2016

Using Y chromosomal haplogroups in genetic association studies and suggested implications

Y chromosomal (Y-DNA) haplogroups are more widely used in population genetics than in genetic epidemiology, although associations between Y-DNA haplogroups and several traits (including cardio-metabolic traits) have been reported. In apparently homogeneous populations, there is still Y-DNA haplogroup variation which will result from population history. Therefore, hidden stratification and/or differential phenotypic effects by Y-DNA haplogroups could exist. To test this, we hypothesised that stratifying individuals according to their Y-DNA haplogroups before testing associations between autosomal SNPs and phenotypes will yield difference in association. For proof of concept, we derived Y-DNA haplogroups from 6,537 males from two epidemiological cohorts, ALSPAC (N=5,080, 816 Y-DNA SNPs) and 1958 Birth Cohort (N=1,457, 1,849 Y-DNA SNPs). For illustration, we studied well-known associations between 32 SNPs and body mass index (BMI), including associations involving FTO SNPs. Overall, no association was replicated in both cohorts when Y-DNA haplogroups were considered and this suggests that, for BMI at least, there is little evidence of differences in phenotype or gene association by Y-DNA structure. Further studies using other traits, Phenome-wide association studies (PheWAS), haplogroups and/or autosomal SNPs are required to test the generalisability of this approach.

Genetics↗