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Samhita, L.

Publications and source records attributed to Samhita, L..

3 recordsLinked to original sources

Cost of altered translation accuracy shapes adaptation to antibiotics in E. coli

Protein synthesis, while central to cellular function, is error-prone. The resulting mistranslation is generally costly, but we do not know how these costs compare or interact with the costs imposed by external selection pressures such as antibiotics. We also do not know whether and how these costs are compensated during evolution. It is important to answer these questions, since mistranslation is ubiquitous and antibiotic exposure, widespread. We quantified the growth cost of genetically increasing and decreasing mistranslation rates, and exposure to low antibiotic concentrations, in Escherichia coli. Mistranslation costs were generally lower than the cost imposed by antibiotics, and exacerbated in a strain-specific manner under antibiotic exposure. All strains quickly compensated the antibiotic cost during experimental evolution, via antibiotic- and genotype-specific mutations. In contrast, mistranslation costs were significantly reduced only in some cases, without clear causal mutations. Control populations that evolved without antibiotics consistently compensated the cost of accuracy, and evolved increased antibiotic resistance as a by-product. Our work demonstrates that even when the cost of mistranslation is weak, altered translation accuracy can shape adaptive outcomes and underlying genetic mechanisms, with strong collateral fitness effects for apparently unrelated phenotypes such as antibiotic resistance.

evolutionary biology↗

THE IMPACT OF MISTRANSLATION ON PHENOTYPIC VARIABILITY AND FITNESS

Phenotypic variation is widespread in natural populations, and can significantly alter their ecology and evolution. Phenotypic variation often reflects underlying genetic variation, but also manifests via non-heritable mechanisms. For instance, translation errors result in about 10% of cellular proteins carrying altered sequences. Thus, proteome diversification arising from translation errors can potentially generate phenotypic variability, in turn increasing variability in the fate of cells or of populations. However, this link remains unverified. We manipulated mistranslation levels in Escherichia coli, and measured phenotypic variability between single cells (individual level variation), as well as replicate populations (population level variation). Monitoring growth and survival, we find that mistranslation indeed increases variation across E. coli cells, but does not consistently increase variability in growth parameters across replicate populations. Interestingly, although any deviation from the wild type (WT) level of mistranslation reduces fitness in an optimal environment, the increased variation is associated with a survival benefit under stress. Hence, we suggest that mistranslation-induced phenotypic variation can impact growth and survival and has the potential to alter evolutionary trajectories.

evolutionary biology↗

Global mistranslation facilitates sampling of beneficial mutations under stress

Mistranslation is typically deleterious, but can sometimes be beneficial. Although a specific mistranslated protein can confer a short-term benefit in a particular environment, the prevalence of high global mistranslation rates remains puzzling given the large overall cost. Here, we show that generalized mistranslation enhances early E. coli survival under various forms of DNA damage, because it leads to early activation of the DNA damage-induced SOS response. Mistranslating cells therefore maintain larger populations, facilitating later sampling of critical beneficial mutations. Thus, under DNA damage, both basal and induced mistranslation (through genetic or environmental means) increase the number of genetically resistant and phenotypically persistent cells. Surprisingly, mistranslation also increases survival at high temperature. This wide-ranging stress resistance relies on Lon protease, which is revealed as a key effector that induces the SOS response in addition to alleviating proteotoxic stress. The new links between error-prone protein synthesis, DNA damage, and generalised stress resistance indicate surprising coordination between intracellular stress responses, and suggest a novel hypothesis to explain high global mistranslation rates.

evolutionary biology↗