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Rudnik, S.

Publications and source records attributed to Rudnik, S..

2 recordsLinked to original sources

TMEM55B promotes anterograde transport and distal axonal distribution of LAMP1-positive organelles

Lysosomal function throughout life is vital for the proper functioning and survival of post-mitotic neurons by mediating cellular signaling, degradation, and recycling processes. Their intracellular transport relies on microtubule-dependent mechanisms involving kinesin and dynein motors. While lysosomes were long thought absent from axons, recent studies have demonstrated the importance of LAMP1-positive endo-/lysosomal organelles in axonal compartments. This study investigates the physiological role of TMEM55B, a lysosomal membrane protein involved in lysosome positioning and motor coupling in neurons. TMEM55B is highly expressed in LAMP1-positive organelles in cortical neurons. We generated viable Tmem55b knockout mice that exhibited altered lysosomal positioning in neurons. Lysosomes clustered abnormally in the pre-axonal exclusion zone and the proximal axon, with many forming elongated tubular structures. Similarly, in primary rat neurons, TMEM55B depletion resulted in lysosomal tubulation and impaired bidirectional lysosomal transport, particularly in distal axon segments, without affecting lysosome velocity in the proximal and mid-axon. These transport defects were consistent with disrupted JIP4 function, a scaffold linking TMEM55B to both dynein and kinesin motors. TMEM55B deficiency did not result in neurodegeneration, behavioral deficits, or reduced lifespan in mice. As an orthogonal approach, we analyzed TMEM55B function in C. elegans. Worms lacking the TMEM55B homolog Y71H2AM.2 showed altered lysosomal dynamics in cholinergic neurons, supporting an evolutionarily conserved role. To test the involvement of TMEM55B's paralog, TMEM55A, in regulating neuronal lysosome positioning, we generated Tmem55a/b double-knockout mice, which exhibit impaired growth, premature death, and an overall aggravated phenotype. Collectively, our findings demonstrate that both TMEM55B and TMEM55A regulate lysosome distribution in neurons, particularly in axons, by influencing JIP4-dependent retro- and, notably, anterograde motor protein-mediated transport. This function is critical for spatial lysosomal homeostasis. Our study underscores the importance of TMEM55A/TMEM55B in regulating neuronal organelle dynamics and may be a factor considered in neurodegenerative diseases involving lysosomal trafficking defects.

cell biology↗

ER-Lysosome Cholesterol Exchange Regulates Lysosomal Motility Through mTOR-Dependent LAMTOR1 Phosphorylation

The subcellular distribution of lysosomes, the main degradative organelles of mammalian cells, responds to metabolic cues in a highly dynamic way. While lysosomal positioning due to amino acid levels is well-characterized, cholesterol-dependent regulation of lysosomal motility is incompletely understood. We explored impaired lysosomal cholesterol export using a mass spectrometry-based multi-OMICs approach, identifying widespread reallocation of resources and signaling pathway modulation. We identified increased phosphorylation at LAMTOR1 serine 56 in response to cholesterol level perturbations. We demonstrate that this phosphorylation site is sufficient to disrupt Rag GTPases/SLC38A9 binding to the Ragulator complex, inhibiting canonical mTORC1 and facilitating binding of BORC, therefore promoting lysosomal retrograde movement. LAMTOR1 S56 phosphorylation responds exclusively to depletion of lysosomal limiting membrane cholesterol, is facilitated by mTOR, and presents a negative feedback loop for amino acid independent displacement of Ragulator bound Rag GTPases, limiting canonical mTORC1 activity. Mass spectrometry data are available via ProteomeXchange with identifier PXD073489. HighlightsO_LIPerturbation of lysosomal cholesterol homeostasis results in adaptation of cellular protein and lipid biosynthesis C_LIO_LILAMTOR1 is phosphorylated at serine 56 via mTORC1 C_LIO_LILAMTOR1 S56 phosphorylation is lysosomal membrane cholesterol dependent C_LIO_LILAMTOR1 S56 phosphorylation disrupts binding of Rag GTPases to the Ragulator complex C_LIO_LILAMTOR1 S56 phosphorylation promotes binding of Ragulator to BORC, facilitating lysosomal retrograde transport C_LI

molecular biology↗