bioRxiv ScienceSearch

Biology subjects

Ratzke, C.

Publications and source records attributed to Ratzke, C..

2 recordsLinked to original sources

Ecological suicide in microbes

The growth and survival of organisms often depend on interactions between them. In many cases, these interactions are positive and caused by a cooperative modification of the environment, such as the cooperative breakdown of complex nutrients in microbes [1]-[3] or the construction of elaborate architectures in social insects [4]. However, organisms can similarly display negative interactions by changing the environment in ways that are detrimental for them, eg by resource depletion or the production of toxic byproducts [5]. Here we find an extreme type of negative interactions, in which bacteria modify the environmental pH to such a degree that it leads to a rapid extinction of the whole population, a phenomenon we call ecological suicide. Modification of the pH is more pronounced at higher population densities, and thus ecological suicide is more likely with increasing bacterial density. Correspondingly, promoting bacterial growth can drive populations extinct whereas inhibiting bacterial growth by the addition of harmful substances - like antibiotics - can rescue them. Moreover, ecological suicide can cause oscillatory dynamics, even in single-species populations. We find ecological suicide in a wide variety of microbes, suggesting that it could play a significant role in microbial ecology and evolution.

systems biology

Modifying And Reacting To The Environmental pH Drives Bacterial Interactions

Microbes usually exist in communities consisting of myriad different but interacting species. These interactions are typically mediated through environmental modifications; microbes change the environment by taking up resources and excreting metabolites, which affects the growth of both themselves and also other microbes. A very common environmental modification is a change of the environmental pH. Here we show that changing and reacting to the pH leads to a feedback loop that can determine the fate of bacterial populations. We find experimentally that these pH changes can decide the fate of bacterial populations; they can either facilitate or inhibit growth, and in extreme cases will cause extinction of the bacterial population. Moreover, modifying the pH can determine the interactions between different species. Understanding how single species change the pH and react to it allowed us to estimate their pairwise interaction outcomes. Those interactions lead to a set of generic interaction motifs--bistability, succession, murder suicide, and mutualism--that may be independent of which environmental parameter is modified and thus reoccur in different microbial systems.

microbiology