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Provost, A.

Publications and source records attributed to Provost, A..

3 recordsLinked to original sources

Hierarchical learning of statistical regularities over multiple timescales of sound sequence processing: A dynamic causal modelling study

The nervous system is endowed with predictive capabilities, updating neural activity to reflect recent stimulus statistics in a manner which optimises processing of expected future states. This process has previously been formulated within a predictive coding framework, where sensory input is either \"explained away\" by accurate top-down predictions, or leads to a salient prediction error which triggers an update to the existing prediction when inaccurate. However, exactly how the brain optimises predictive processes in the stochastic and multi-faceted real-world environment remains unclear. Auditory evoked potentials have proven a useful measure of monitoring unsupervised learning of patterning in sound sequences through modulations of the mismatch negativity component which is associated with \"change detection\" and widely used as a proxy for indexing learnt regularities. Here we used dynamic causal modelling to analyse scalp-recorded auditory evoked potentials collected during presentation of sound sequences consisting of multiple, nested regularities and extend on previous observations of pattern learning restricted to the scalp level or based on single-outcome events. Patterns included the regular characteristics of the two tones presented, consistency in their relative probabilities as either common standard (p = .875) or rare deviant (p = .125), and the regular rate at which these tone probabilities alternated. Significant changes in connectivity reflecting a drop in the precision of prediction errors based on learnt patterns were observed at three points in the sound sequence, corresponding to the three hierarchical levels of nested regularities: (1) when an unexpected \"deviant\" sound was encountered; (2) when the probabilities of the two tonal states altered; and (3) when there was a change in rate at which probabilities in tonal state changed. These observations provide further evidence of simultaneous pattern learning over multiple timescales, reflected through changes in neural activity below the scalp.\n\nAuthor summaryOur physical environment is comprised of regularities which give structure to our world. This consistency provides the basis for experiential learning, where we can increasingly master our interactions with our surroundings based on prior experience. This type of learning also guides how we sense and perceive the world. The sensory system is known to reduce responses to regular and predictable patterns of input, and conserve neural resources for processing input which is new and unexpected. Temporal pattern learning is particularly important for auditory processing, in disentangling overlapping sound streams and deciphering the information value of sound. For example, understanding human language requires an exquisite sensitivity to the rhythm and tempo of speech sounds. Here we elucidate the sensitivity of the auditory system to concurrent temporal patterning during a sound sequence consisting of nested patterns over three timescales. We used dynamic causal modelling to demonstrate that the auditory system monitors short, intermediate and longer-timescale patterns in sound simultaneously. We also show that these timescales are each represented by distinct connections between different brain areas. These findings support complex interactions between different areas of the brain as responsible for the ability to learn sophisticated patterns in sound even without conscious attention.

neuroscience↗

PTSD Biomarker Database: Deep Dive Meta-database for PTSD Biomarkers, Visualizations, and Analysis Tools

The PTSD Biomarker Database (PTSDDB) is a database that provides a landscape view of physiological markers being studied as putative biomarkers in the current post-traumatic stress disorder (PTSD) literature to enable researchers to quickly explore and compare findings. The PTSDDB currently contains over 900 biomarkers and their relevant information from 109 original articles published from 1997 to 2017. Further, the curated content stored in this database is complemented by a web application consisting of multiple interactive visualizations that enable the investigation of biomarker knowledge in PTSD (e.g., clinical study metadata, biomarker findings, experimental methods, etc.) by compiling results from biomarker studies to visualize the level of evidence for single biomarkers and across functional categories. This resource is the first attempt, to the best of our knowledge, to capture and organize biomarker and metadata in the area of PTSD for storage in a comprehensive database that may, in turn, facilitate future analysis and research in the field. Database URLhttps://ptsd.scai.fraunhofer.de

bioinformatics↗

Largest genome-wide association study for PTSD identifies genetic risk loci in European and African ancestries and implicates novel biological pathways

Post-traumatic stress disorder (PTSD) is a common and debilitating disorder. The risk of PTSD following trauma is heritable, but robust common variants have yet to be identified by genome-wide association studies (GWAS). We have collected a multi-ethnic cohort including over 30,000 PTSD cases and 170,000 controls. We first demonstrate significant genetic correlations across 60 PTSD cohorts to evaluate the comparability of these phenotypically heterogeneous studies. In this largest GWAS meta-analysis of PTSD to date we identify a total of 6 genome-wide significant loci, 4 in European and 2 in African-ancestry analyses. Follow-up analyses incorporated local ancestry and sex-specific effects, and functional studies. Along with other novel genes, a non-coding RNA (ncRNA) and a Parkinsons Disease gene, PARK2, were associated with PTSD. Consistent with previous reports, SNP-based heritability estimates for PTSD range between 10-20%. Despite a significant shared liability between PTSD and major depressive disorder, we show evidence that some of our loci may be specific to PTSD. These results demonstrate the role of genetic variation contributing to the biology of differential risk for PTSD and the necessity of expanding GWAS beyond European ancestry.

genetics↗