bioRxiv Science⌕ Search

Biology subjects

Portes, M.

Publications and source records attributed to Portes, M..

2 recordsLinked to original sources

Unique rhythmic signatures in arrhythmic birdsong

Animal rhythms are gaining increasing attention in the studies of behaviour and musicology. Recently, it has been shown that rhythm itself can be used as an information coding channel. Now we ask: does this hold true for arrhythmic sequences? To answer that, we analysed songs of the tawny pipits (Anthus campestris), migratory songbirds known for their simple songs. Using focal recordings of 384 individuals from six populations collected across their European breeding range, we calculated an extensive set of rhythmic and temporal indices to describe each song. First, the pattern of these songs was inspected and shown to be arrhythmic. Second, songs belonging to specific individuals and populations were compared using permuted discriminant function analysis and supervised uniform manifold approximation and projection. To describe the level of individuality of the rhythmic structure alone, we calculated Beechers statistic for all songs, as well as the potential of identity coding for each parameter separately. We show that tawny pipit males sing using individual rhythmic patterns in their arrhythmic songs, and that modern rhythmic indices, such as beat precision and integer ratios, are among some of the most individually distinct parameters of their songs. Furthermore, contrary to previous investigations based on the spectral shape and basic frequency and temporal characteristics of these songs, we show that the species displays population-specific temporal patterns, with significant differences throughout its European range. This study is the first to demonstrate geographic scale differences in birdsong rhythm, and to show that rhythmic analysis can provide useful descriptions of arrhythmic sequences.

animal behavior and cognition↗

Nanoscale architecture and coordination of actin cores within the sealing zone of human osteoclasts

Osteoclasts are unique in their capacity to degrade bone tissue. To achieve this process, osteoclasts form a specific structure called the sealing zone, which creates a close contact with bone and confines the release of protons and hydrolases for bone degradation. The sealing zone is composed of actin structures called podosomes nested in a dense actin network. The organization of these actin structures inside the sealing zone at the nano scale is still unknown. Here, we combine cutting-edge microscopy methods to reveal the nanoscale architecture and dynamics of the sealing zone formed by human osteoclasts on bone surface. Random illumination microscopy allowed the identification and live imaging of densely packed actin cores within the sealing zone. A cross-correlation analysis of the fluctuations of actin content at these cores indicates that they are locally synchronized. Further examination shows that the sealing zone is composed of groups of synchronized cores linked by -actinin1 positive filaments, and encircled by adhesion complexes. Thus, we propose that the confinement of bone degradation mediators is achieved through the coordination of islets of actin cores and not by the global coordination of all podosomal subunits forming the sealing zone.

cell biology↗