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Podrabsky, J.

Publications and source records attributed to Podrabsky, J..

2 recordsLinked to original sources

Anoxia Tolerant DNA Replication is Supported by ATR Kinase in the Annual Killifish Austrofundulus limnaeus

Hypoxia and anoxia are known to suppress cell proliferation due to an increase in replication stress and activation of DNA damage checkpoints. Embryos of the annual killifish Austrofundulus limnaeus show a strong tolerance to extended anoxic exposure, indicating an improved genomic stability under oxygen starvation. Here we investigate the cell cycle regulation of the anoxia tolerant killifish embryonic cell line PSU-AL-WS40NE during anoxic exposure. Live cell imaging confirms continued cell proliferation of WS40NE cells for the first 24 hours of anoxic exposure with minimal cell death. Fluorescent imaging shows that cells begin to accumulate in G1 after the first day in anoxia with a pronounced and rapid entry into the S phase upon reoxygenation. Pharmacological inhibition tests show that this response appears to be reliant more on ATR signaling then ATM, suggesting that increased {gamma}H2AX levels are driven by increased replication stress instead of DNA damage. This conclusion is further supported by an apparent lack of induction of a G2 checkpoint in these cells suggesting that DNA damage during anoxic replication is minimal. Maintaining cellular proliferation during initial exposure to anoxia and accumulating cells in the G1 phase for extended anoxic exposure is likely one way that embryos of the annual killifish are able to survive prolonged anoxia and provides insight into mechanisms that enable cells to proliferate under metabolic stress.

cell biology↗

Changes in Histone Isoform Abundance and Histone Post-Translational Modifications during Anoxia Tolerance and Recovery in WS40NE cells of Austrofundulus limnaeus

Anoxia is an often-lethal stressor to vertebrates, yet some vertebrates have adapted cellular mechanisms to survive in anoxic conditions. Embryos of the annual killifish Austrofundulus limnaeus have the greatest tolerance to anoxia of all vertebrates, yet the epigenetic mechanisms that support their anoxia tolerance are unknown. Using mass spectrometry, 1043 unique biologically relevant histone post-translational modifications (unimod+histone residue) were detected in WS40NE cells, representing thirteen types of biologically relevant histone post-translational modifications (hPTMs) present during normoxia, 1 d anoxia, 4 d anoxia, and aerobic recovery from anoxia. Of these 1043 hPTMs, 816 were significantly differentially expressed in at least one comparison. Thirty-six significant hPTMs were considered highly condition dependent. Additionally, at least four histone isoforms were differentially expressed, representing H2A, H2B, and H3 isoforms. Our data suggests that specific histone modifications as well as changes in histone isoform abundance in WS40NE cells may be necessary to successfully respond to extreme changes in oxygen availability.

cell biology↗