Biology subjects

Philippar, K.

Publications and source records attributed to Philippar, K..

3 recordsLinked to original sources

bioRxiv2025

The chloroplast ionome shines new light on organellar Fe homeostasis

Annually, chloroplasts fix 258 billion tons of CO2 through photosynthesis. Photosynthesis and other biochemical pathways require specific amounts of metal ions in the organelle. Transport proteins in the plastid inner envelope maintain the organellar ion homeostasis. Despite substantial progress over the last decades, many genes encoding for plastid ion channels and ion carriers or their regulators remain unknown. To fill this knowledge gap, detailed information on the elemental composition of chloroplasts i.e., a plastid ionome, is needed. This will allow to compare mutants of transporter candidates with wild-types. Here, we provide quantitative descriptions of chloroplast ionomes from Arabidopsis thaliana, the metal hyperaccumulator Arabidopsis halleri, Pisum sativum, and Nicotiana benthamiana and analyze similarities and distinctions. Using A. thaliana, we show that plastid ionomes can be genetically manipulated. Chloroplasts of oligopeptide transporter3 (opt3)-deficient mutants contain 14-fold more iron, which they deposit into stromal FERRITIN. The removal of FERRITIN in opt3 mutants leads to a substantial decrease in plastid and leaf iron pointing to important signaling linked to the chloroplast ionome. Our study reveals that chloroplasts can be turned into large iron storages. Since crop biofortification to fight hidden hunger has become a global mission, this research provides groundwork to reach this goal.

plant biology↗

bioRxiv2023

Degradation of Fatty Acid Export Protein1 by Rhomboid-Like Protease11 Contributes to Cold Tolerance in Arabidopsis

Plants need to adapt to different stresses to optimize growth under unfavorable conditions. The abundance of the chloroplast envelope located Fatty Acid Export Protein1 (FAX1) decreases after the onset of low temperatures. However, it was unclear how FAX1 degradation occurs and whether altered FAX1 abundance contributes to cold tolerance in plants. The rapid cold-induced increase in rhomboid-like protease11 (RBL11) transcript, the physical interaction of RBL11 with FAX1, the specific FAX1 degradation after RBL11 expression, and the absence of cold-induced FAX1 degradation in rbl11 loss-of-function mutants suggest that this enzyme is responsible for FAX1 degradation. Proteomic analyses showed that rbl11 mutants have higher levels of FAX1 and other proteins involved in membrane lipid homeostasis, suggesting that RBL11 is a key element in the remodeling of membrane properties during cold. Consequently, in the cold, rbl11 mutants show a shift in lipid biosynthesis towards the eukaryotic pathway, which coincides with impaired cold tolerance. To demonstrate that cold sensitivity is due to increased FAX1 levels, FAX1 overexpressors were analyzed. rbl11 and FAX1 overexpressor mutants show superimposable phenotypic defects upon exposure to cold temperatures. Our results show that the cold-induced degradation of FAX1 by RBL11 is critical for Arabidopsis to survive cold and freezing periods. One sentence summaryDegradation of the inner envelope protein Fatty Acid Export1 via Rhomboid Like Protease11 represents a critical process to achieve cold and frost tolerance in Arabidopsis

plant biology↗

bioRxiv2023

Plastid fatty acid export (FAX) proteins in Arabidopsis thaliana - the role of FAX1 and FAX3 in growth and development

In plant cells, fatty acid (FA) synthesis occurs in the plastid stroma and thus requires subsequent FA export for lipid assembly in the endoplasmic reticulum. In this context, the membrane-intrinsic protein FAX1 has been described to mediate FA-export across the plastid inner envelope (IE). In Arabidopsis, FAX1 function is crucial for pollen cell wall formation, male fertility, cellular lipid homeostasis and plant biomass. Based on conserved structural features and sequence motifs, we here define the plant FAX-protein family localized in plastids. Besides their membrane-intrinsic domain, the plastid-targeted FAX1-FAX3 contain distinct N-terminal stretches. Among them, the apolipoprotein-like -helical bundle of FAX2 is the most prominent. Further, we could unequivocally localize FAX2 and FAX3 proteins together with FAX1 to the IE membrane of chloroplasts and develop a topology model for FAX1, FAX2, and FAX3. In yeast, all plastid FAX proteins - i.e. FAX1, FAX2, FAX3, FAX4 - can complement for FA-transport function. For FAX1 we show a new function in pollen tube growth as well as together with FAX3 in seed/embryo development and in rosette leaf growth. Since in comparison to fax1 single knockout mutants, fax1/fax3 double knockouts are seedling lethal and not able to develop mature rosette leaves, we conclude that FAX1 and FAX3 function together in vegetative leaf growth. HighlightWe define distinct structural features of plant FAX proteins in plastids and demonstrate that FAX1 and FAX3 have complementary functions in vegetative leaf growth.

plant biology↗