Biology subjects

Pegu, S. R.

Publications and source records attributed to Pegu, S. R..

4 recordsLinked to original sources

bioRxiv2023

Mass spectrometric analysis and biostimulatory effects of boar seminal gel, saliva and semen in pigs

The present study aimed to identify novel biostimulatory compounds in boar seminal gel (SG), saliva and semen using Gas chromatography-mass spectrometry (GC-MS). SG alone and its combined application with saliva (SG+saliva) and semen (SG+semen) also studied to train young boars. SG alone and SG+Saliva investigated for estrus induction in gilts and sows. Distilled water (DW) exposure was kept as control. SG, saliva and semen screened for total 105, 96 and 89 compounds. The highest concentration was of alkanes followed by sugar alcohols, then hydrocarbons, amino acids and fatty acids. Elaidic acid is the novel compound identified in pigs. Other compounds were tridecenol, undecane, hexadecone, eicosane, tetracosane etc. Further, young males (64.86%) were able to get trained. Significant higher (p<0.05) number of males got trained in exposure to SG (80%), SG+saliva (75%) and SG+semen (75%) than control. The time (hrs) taken by young boars to get trained on exposure to combination of SG+saliva (244{+/-}22.19) and SG+semen (216{+/-}13.14) was lesser (p<0.05) than SG (356{+/-}61.85) alone. Interval (hrs) for exhibition of different sexual behaviour by males on exposure to SG, saliva and semen was lesser (p<0.05) than control. Estrus was induced in 61.25% of females. Significant (p<0.05) higher number of females showed estrus response to exposure of SG (72.72%) and SG+saliva (69.23%) than control. Interval taken to exhibit estrus was lesser (p<0.05) in females exposed to SG+saliva (201.88{+/-}12.66) than SG (262.14{+/-}20.06) alone. Interval (hrs) for exhibition of different sexual behaviour by females on exposure to SG+saliva was lesser (p<0.05) than control. In conclusion, novel compounds with biostimulatory properties have been identified in boar SG, saliva and semen. The combined exposure of SG with saliva and semen have more intense biostimulation effect than SG alone. Such compounds and biostimulatory effects can be exploited for augmenting reproductive efficiency in pigs.

animal behavior and cognition↗

bioRxiv2023

Metagenomic analysis of Pigs' faecal microbiome and its functional response associated with dietary fibre

Pig husbandry is the most valued and economically sustainable husbandry in the livestock farming system. The performance and productivity of the pig are chiefly dependent on the nutritional factor steered by gut beneficial bacteria. The swine gut microbiome has a direct relationship with feed efficiency. As a consequence, identifying microbial taxonomy and functional capacity is critical for proper nutrient digestion. In the present investigation, eighteen grower pigs aged 3 months and weighing 30{+/-}0.55 kg were allocated into three different groups using a randomized block layout and supplemented with QPM maize fodder of 0, 5, and 10% to the basal diet by substituting (wt/wt on DM) the maize grains, and named as T0, T1, and T2 to probe the increase in gut beneficial bacteria found in the faecal contents. For comparison with T0, T1, and T2, a random faecal sample designated R was collected from six grower pigs of the same age group and bodyweight fed a maize-soya bean-based diet. The experiment is being carried out to investigate the effect of various maize fodder levels on the metagenomic profiles of pig gut microbiota using the 16S rRNA gene. All of the experimental diets were iso-nitrogenous, with protein content ranging from 18.37 to 18.63 per cent. The data generated by 16S rRNA amplicon analysis was 68, 56, 61, and 39 Mb in R, T0, T1, and T2 samples, respectively. From taxonomic distribution, bacterial phyla namely Firmicutes, Bacteroidetes, Proteobacteria, and Spirochetes are found in descending order of relative abundance in the R, T0, and T1 groups, respectively, while Spirochaetes, Proteobacteria, Fibrobacteres, Bacteroidetes, and Firmicutesare found in descending order of relative abundance in the T2 group. The relative profusion of Fibrobacter succinogenes is 0.89% and 16.84% in the T1 and T2 groups. According to the findings, a higher level of maize fodder in the diet of grower pigs promotes the growth of fibre-degrading bacteria in the gut microbiota, particularly Fibrobacter succinogenes. Moreover, feeding green maize has decreased the population of methanobacteria in the gut of pigs, which in turn has limited the production of methane.

genomics↗

bioRxiv2022

Detection and Whole Genome of Japanese Encephalitis Virus Genotype III strains isolated from Indian Pig and Mosquito vector

Japanese encephalitis virus(JEV) are globally prevalent as deadly pathogens in human and animals including pig, horse and cattle. Japanese encephalitis (JE) still remains as an important cause of epidemic encephalitis worldwide and exists in a zoonotic transmission cycle. Assam is one of the highly endemic state for JE in India. In the present study, to understand the epidemiological status of JE circulating in pigs and mosquito particularly in Assam, India, molecular detection of JEV and the complete genome sequencing of the JEV isolates from pig and mosquito were done. The complete genome analysis of two JEV isolates from pig and mosquito were revealed7 and 21 numbers of unique points polymorphism of nucleotide during alignment of the sequences with other available sequences, respectively. Phylogenetic analysis revealed that the isolates of present investigation were belongs to genotype III and closely related with the strains of neighbouring country China. This study represents the transboundary nature of the JEV genotype III circulation and maintained the same genotype through mosquito-swine transmission cycles.

genomics↗

bioRxiv2022

Whole-Genome Sequence of African Swine Fever Virus isolate from India provides insights into diversity and evolution

African swine fever (ASF) was first reported in 1921, and since then has posed a major threat to the world pig industry and still remains a major challenge as there is no vaccine or therapy available. In May 2020, the first incidence of ASF was recorded in India, followed by a number of outbreaks in the north eastern part of India. In this study, we report the first whole genome of an Indian isolate of ASF virus (ASF/IND/20/CAD/543) using next generation sequencing and compared with the other ASFV complete genome. On phylogenetic analysis, the virus was assigned to genotype II on the basis of p72 genotyping. However, the whole genome based phylogeny distinguished it from other genotype II isolates of clade 1.1.1. This study adds to our understanding of ASFVs genetic diversity and molecular evolution.

microbiology↗