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Parulekar, N.

Publications and source records attributed to Parulekar, N..

2 recordsLinked to original sources

Vocal sequences of diverse parrots suggest an important role for note repetition

Sequencing and syntax in complex animal vocal signals have been studied using several mathematical analyses. Commonly, sequences of vocalizations are assumed to follow a first-order Markov process, where each state depends on the state immediately before it. However, more recent computational analyses challenge this assumption, suggesting alternative processes may be important in vocal sequences. Open-ended vocal learners such as parrots possess complex, variable vocal sequences that may be dynamically modified throughout their lives and contain information about group membership and identity. Although this makes them important systems in which to identify general patterns within vocal sequences, parrot vocalizations remain generally understudied compared to passerine birds. Here, we examined vocal sequence structure in six species of parrots (Psittaculidae). We fit various metrics of sequence structure to those generated by multiple simulated processes, including Markov, random, hidden Markov and renewal processes. Two metrics exhibited the best fit to a renewal process (where a note repeats a certain number of times before transitioning to a new note), and two others to Markov processes. Importantly, all analyses were broadly concordant across species, and multiple metrics indicated an elevated probability of note repetition. Reconciling these results, we suggest a general vocal mechanism across the highly variable vocal sequences of parrots, where both note repetition and Markov processes are important. Note repetition patterns could help communicate individual or group identity, as well as social and behavioral context. Our study thus extends a simulation-based approach using diverse metrics to comparatively examine the complex, variable vocal sequences of these open-ended vocal learners.

animal behavior and cognition↗

Whole genome doubling confers unique genetic vulnerabilities on tumor cells

Whole genome doubling (WGD) occurs early in tumorigenesis and generates genetically unstable tetraploid cells that fuel tumor development. Cells that undergo WGD (WGD+) must adapt to accommodate their abnormal tetraploid state; however, the nature of these adaptations, and whether they confer vulnerabilities that can subsequently be exploited therapeutically, is unclear. Using sequencing data from [~]10,000 primary human cancer samples and essentiality data from [~]600 cancer cell lines, we show that WGD gives rise to common genetic traits that are accompanied by unique vulnerabilities. We reveal that WGD+ cells are more dependent on spindle assembly checkpoint signaling, DNA replication factors, and proteasome function than WGD- cells. We also identify KIF18A, which encodes for a mitotic kinesin, as being specifically required for the viability of WGD+ cells. While loss of KIF18A is largely dispensable for accurate chromosome segregation during mitosis in WGD- cells, its loss induces dramatic mitotic errors in WGD+ cells, ultimately impairing cell viability. Collectively, our results reveal new strategies to specifically target WGD+ cancer cells while sparing the normal, non-transformed WGD- cells that comprise human tissue.

cancer biology↗