Biology subjects

Parmenter, A. L.

Publications and source records attributed to Parmenter, A. L..

8 recordsLinked to original sources

bioRxiv2026

Cross-species structure-mechanics prediction in the intervertebral disc

Despite long-standing uncertainty regarding the suitability of animal intervertebral disc (IVD) models for the study of human IVD pathophysiology, few cross-species studies have integrated hierarchical structure with mechanical function. In this study, we present a multiscale structure-mechanics framework combining synchrotron computed tomography (sCT), fibre tracing, digital volume correlation (DVC) with structure-based mechanical inference and finite-element modelling. Rat, mini-pig and human IVDs (n = 3/species) were imaged by sCT, with rat and mini-pig discs additionally subjected to in situ uniaxial compression and DVC. A Structure Index (SI), integrating local structural anisotropy and fibre orientation, was developed to regionally pinpoint the location of mechanically vulnerable regions. Cross-species comparison showed scale-dependent structural conservation: gross disc and lamellar organisation retained common regional features, whereas fibre-bundle architecture exhibited greater species- and regional divergence. Despite these differences, lower SI was consistently associated with elevated deformation in rat and mini-pig discs across multiple strain measures. Structure-strain inverse correlations became tighter within progressively higher-strain domains, reaching Spearman p values of approximately -0.5 to -0.7 for several strain components. Synthetic fibre phantoms confirmed that SI reflects a coupling of fibre orientation and organisation, with additional sensitivity to fibre number in poorly organised configurations. In human discs with varying degrees of degeneration, SI revealed spatial heterogeneity and redistribution of structurally vulnerable regions. Fibril-informed homogenisation provided anisotropic material properties for organ-scale finite-element modelling that independently supported SI-based predictions. Overall, these findings establish a cross-species framework linking hierarchical collagen architecture to mechanical vulnerability and provide a basis for non-invasive, structure-driven biomechanical assessment of human IVD degeneration and mechanical risk.

bioengineering↗

bioRxiv2026

Revealing multiscale architecture of the intact human spine using hierarchical phase contrast tomography

Background: Computed tomography (CT) and magnetic resonance imaging (MRI) provide detailed clinical assessment of the human spine; however, their millimeter-scale spatial resolution limits direct visualization of tissue microarchitecture and interfaces. Hierarchical phase-contrast tomography (HiP-CT) enables ex vivo non-destructive, micron-resolution imaging of intact human organs without exogenous contrast agents, extending anatomical assessment to spatial scales inaccessible to conventional clinical imaging. Purpose: To evaluate the capability of HiP-CT to visualize macro- to microanatomy of an intact adult human spine ex vivo. Methods: An intact spine (C1-L5) from a 62-year-old male donor without known skeletal disease was formalin-fixed and imaged by HiP-CT at the European Synchrotron. Whole-spine imaging was performed at 16.26 m isotropic voxels, with selected regions of interest imaged using 2.2 m voxels. Ex vivo MRI using clinical sequences was performed for anatomical comparison. Three-dimensional segmentation and quantitative analyses included intervertebral disc (IVD) grading, annulus fibrosus fiber tracing, and vertebral trabecular micro-morphometry. Results: HiP-CT enabled high spatial-resolution, multiscale imaging of the intact human spine, simultaneously visualizing vertebral bone and endplate, IVDs, spinal cord and meninges, nerve roots and ganglia, vasculature, ligaments, and musculature. Three-dimensional segmentation and virtual sectioning mapped neurovascular anatomy and vertebral vascular supply, without exogenous contrast enhancement, while preserving their relationships with surrounding tissues. Whole-spine images enabled quantitative analysis of annulus fibrosus fiber organization and vertebral trabecular microarchitecture, permitting the detection of focal posterolateral fiber disruption at the L4-L5 IVD and regional differences in trabecular architecture between cervical and lumbar vertebral bodies. Local tomography resolved annulus fibrosus lamellae, vertebral endplate Haversian systems, and facet joint hyaline cartilage at micron resolution. Conclusions: HiP-CT enables non-destructive, multiscale three-dimensional imaging of the intact human spine while preserving tissue relationships across spatial scales and hard-soft tissue boundaries. HiP-CT could provide an ex vivo microanatomical reference for future correlation with clinical imaging investigations of spinal disease and in the development and validation of imaging biomarkers.

bioengineering↗

bioRxiv2026

Articular calcified cartilage microarchitecture has a predictive role in abnormal osteochondral strain distributions in murine age-related osteoarthritis

Even though osteoarthritis is considered a disease of the whole joint, integrated analysis of articular calcified cartilage (ACC) behaviour with adjacent tissues remains a persistent limitation. Herein, we performed synchrotron X-ray computed tomography in intact loaded joints and coupled anatomical analysis with digital volume correlation to examine whether microarchitectural ACC features serve as predictive mechano-biomarkers of osteoarthritis. We reveal that male osteoarthritis-prone STR/Ort mice have thicker yet more porous ACC that contains larger but less spherical chondrocyte lacunae than their healthy parental-control CBA mice. This was linked to asymmetrical distribution of tensile and compressive strains generated under physiological loads in the ACC and underlying subchondral bone in tibial epiphyses of STR/Ort mice. Together these data suggest that murine ACC microarchitecture has a mechano-predictive role in age-related osteoarthritis.

physiology↗

bioRxiv2026

Optimising digital volume correlation across materials: a practical framework for accuracy and spatial resolution

Digital volume correlation (DVC) provides full-field three-dimensional measurements of internal deformation, but its accuracy and effective spatial resolution depend on image-processing and analysis choices. Here, we use fibrous, cartilaginous and mineralised tissues within a rat intervertebral disc (IVD) as a controlled multi-material case study, combining virtual compression with experimentally loaded synchrotron computed tomography images. We systematically evaluate phase retrieval and image filtering, bit-depth conversion, point-cloud design, subvolume size and strain-field smoothing. Stronger phase retrieval reduced correlation residuals while increasing displacement and strain errors, showing that residual minimisation alone can select poorer parameters. Image filtering sensitivity was greatest in fibrous tissue, which had the smallest characteristic image feature size, whereas inappropriate intensity mapping during 16-bit to 8-bit conversion preferentially degraded low-contrast cartilage. Increasing subvolume size, point spacing or strain-window size improved measurement robustness but progressively smoothed local strain heterogeneity. We demonstrate that the spatial resolution of strain measurement must be matched across tissue types in order to compare strain magnitude; in the IVD, matching DVC spatial resolution changed the apparent ratio of compressive strain among fibrous, cartilaginous and mineralised tissues from 3.1:1.9:1 to 14:7.7:1. These findings establish a sequential, deformation-based optimisation framework in which image characteristics guide processing, known deformations validate accuracy and strain fields are compared at matched measurement scales. The framework supports more reproducible and mechanically interpretable DVC analyses in heterogeneous biological and engineered materials.

bioengineering↗

bioRxiv2025

In situ profiling of nanoscale displacements uncovers mechano-architectural predictors of osteoarthritis emergence

Mechanical and anatomical interplay between the distinct tissues of the knee joint is essential for maintaining functional integrity during healthy ageing and contributes to the mechanisms that drive osteoarthritis (OA). In this study, we investigate how age- and disease-associated alterations in joint anatomy influence load transmission and tissue-level strain distribution. Using full-field synchrotron X-ray computed tomography coupled with digital volume correlation, we hierarchically characterised in situ nanoscale strains generated in response to mechanical loading across the tibial epiphysis. Our findings show that greater compressive strains accumulate in the articular condyle of male OA-prone (STR/Ort) epiphyses. Finite element modelling further demonstrated that these strain concentrations are associated with reduced load-bearing capacity, which arise from architectural differences localised to the subchondral bone plate. By coupling high-resolution imaging with computational modelling, our work provides new insights into how structural-function changes to joint anatomy contribute to the initiation and progression of mechanically driven OA. Our approach offers a means to identify early imaging biomarkers prior to OA diagnosis and has potential for monitoring interventions aimed at preserving joint mechanics while promoting healthy joint ageing.

bioengineering↗

bioRxiv2025

Multimodal X-ray imaging reveals hierarchical fibre mechanics

Fibrous materials--ranging from connective tissues to engineered composites--are vital to many biological and man-made systems, optimised to withstand complex in-operando or in-vivo loading. The spines intervertebral discs (IVD) load-bearing capacity depends on a hierarchical extracellular matrix, where plywood-like lamellae of collagen fibres in the annulus fibrosus contain nanometre-scale fibrils built from staggered triple-helical monomers. How intact IVDs couple fibril-scale mechanics to fibre-scale organisation under load remains unresolved. Here we introduce TomoSAXS, a full-field 3D small-angle X-ray scattering tomography that maps fibril-to-fibre mechanics across an intact tissue. We show that intrafibrillar molecular pre-strain (D-period stagger) is lamellar textured and tightly correlated with microscale fibre strain. Pre-strain is inversely related to fibril strain and its variability, consistent with load-sharing through molecular unwinding. Radial strain bridges and high-curvature zones at the annulus fibrosus-nucleus pulposus interfaces emerge as critical regulators of local mechanics. These findings reveal concerted fibril-fibre interactions that sustain mechanical equilibrium in the IVD, preserving elasticity and shape. More broadly, TomoSAXS establishes a platform to visualise nano- to micro-scale matrix mechanics across biological and synthetic fibrous materials, with applications in ageing and disease, therapeutic evaluation, and the design of bio-based and bioinspired materials.

bioengineering↗

bioRxiv2024

Synchrotron Tomography-Based Finite Element Analysis of Vertebral Endplate Loading Reveals Functional Roles for Architectural Features

Lower back pain is linked to vertebral biomechanics, with vertebral endplates (VEPs) playing a key role. Finite element modelling (FEM) is a powerful tool for studying VEP biomechanics but relies on accurate material property inputs, which remain difficult to obtain. Synchrotron computed tomography (sCT) allows for detailed visualisation of the microstructure of intact VEPs under near-physiological loads and, when coupled with digital volume correlation (DVC), can be used to quantify three-dimensional (3D) strain fields, providing experimental reference data for FEM validation. We developed an inversion pipeline to spatially couple DVC data with an image-based FE model, and thus to estimate the elastic properties of rat VEPs. On the first rat lumbar FEM, the pipeline estimated a VEP elastic modulus of 129 MPa and a Poissons ratio of 0.24. Welchs ANOVA revealed statistically significant differences between FEM and DVC strain distributions (p < 0.001) but with small effect sizes ({superscript 2} = 0.1%-0.6%), indicating high practical similarity. Its efficacy was further validated using Bland-Altman analysis, demonstrating over 95% spatial agreement between the FEM-predicted strains and the DVC measurements across multiple loading steps. The pipelines consistency was further evaluated across multiple rat lumbar FE models (n = 3), yielding an estimated VEP elastic modulus = 145 {+/-} 18 MPa and a Poissons ratio = 0.28 {+/-} 0.04. Statistically significant regional variations of strain distribution in VEPs were also identified (p < 0.05 to p < 0.001, {superscript 2} up to 41.8%). This study highlighted the efficacy of the developed pipeline in estimating the isotropic elastic modulus and Poissons ratio of VEP FEMs in a physiologically relevant, complex load transfer system. Our pipeline may be used in estimating properties of VEP in larger animals and humans.

bioengineering↗

bioRxiv2024

Multimodal imaging reveals multiscale mechanical interplay in vertebral endplate microarchitecture during intervertebral disc loading

The function of all musculoskeletal joints depends on hierarchical structures spanning the molecular to whole joint scales. Investigating biomechanics across length scales requires correlative multiscale experimental methods. This study applies multimodal in situ synchrotron imaging techniques to spinal joints - focussing on the vertebral endplates - to explore relationships between structure and mechanical strain across spatial scales. Strain mapping using digital volume correlation combined with microarchitectural analysis reveals that high tensile and shear strains play a role in the cartilage to bone transition. Correlative imaging and diffraction show that bone contains narrower mineral nano-crystallites under greater compressive prestrain compared to calcified cartilage. We hypothesise that this multiscale structural adaptation supports the mechanical function of the intervertebral disc. Future applications of the techniques presented here have potential to help unravel biomechanical underpinnings of pathologies affecting mineralised tissue structure. The multiscale structure-function relationships uncovered here may inspire the design of biomaterials and orthopaedic implants.

bioengineering↗