Biology subjects

Papaspyros, V.

Publications and source records attributed to Papaspyros, V..

3 recordsLinked to original sources

bioRxiv2026

Closed-loop robotic interactions reveal dynamic social filtering in schooling fish

Collective motion emerges from local interactions among individuals, yet whether interaction rules inferred from trajectory data correspond to the mechanisms actually used by animals remains unresolved. Here, we address this question using an autonomous closed-loop robotic fish implementing a data-driven model of social interactions reconstructed from the schooling fish Hemigrammus rhodostomus. The robot continuously updated its behavior from real-time tracking of freely swimming fish while reproducing spontaneous locomotion, wall avoidance, and anisotropic attraction and alignment. We compared entirely biological groups, biohybrid groups containing one robotic fish, and numerical simulations using identical behavioral descriptors across isolated individuals, pairs, and groups of five fish. The robotic fish successfully integrated into natural schools and reproduced the principal signatures of collective coordination, providing the first direct causal validation of interaction rules reconstructed from behavioral trajectories. Biohybrid experiments showed that a robot responding only to its single most influential neighbor was sufficient to sustain natural collective coordination. By contrast, numerical simulations reproduced the behavior of biological groups most accurately when each fish interacted with its two most influential neighbors. This discrepancy identifies the contribution of hydrodynamic interactions, which remain available to living fish but are absent from the robotic controller, demonstrating that physical and behavioral interactions jointly shape collective organization. These findings establish closed-loop biohybrid robotics as a powerful framework for experimentally testing the mechanisms underlying collective animal behavior. SignificanceInferring the behavioral mechanisms underlying collective animal behavior from trajectory data alone cannot establish causality. We combined a data-driven model of fish social interactions with an autonomous closed-loop robotic fish that continuously interacted with freely swimming conspecifics. This biohybrid approach provides the first direct causal validation of interaction rules reconstructed from behavioral trajectories. Comparing biological groups, biohybrid groups, and numerical simulations further reveals that hydrodynamic interactions complement social interactions in shaping collective organization. While living fish require information from their two most influential neighbors to reproduce natural schools, a robotic fish lacking hydrodynamic feedback achieves comparable coordination by responding to only its single most influential neighbor, demonstrating the power of closed-loop biohybrid robotics for testing mechanisms of collective behavior.

animal behavior and cognition↗

bioRxiv2023

Predicting long-term collective animal behavior with deep learning

Deciphering the social interactions that govern collective behavior in animal societies has greatly benefited from advancements in modern computing. Computational models diverge into two kinds of approaches: analytical models and machine learning models. This work introduces a deep learning model for social interactions in the fish species Hemigrammus rhodostomus, and compares its results to experiments and to the results of a state-of-the-art analytical model. To that end, we propose a systematic methodology to assess the faithfulness of a model, based on the introduction of a set of stringent observables. We demonstrate that machine learning models of social interactions can directly compete against their analytical counterparts. Moreover, this work demonstrates the need for consistent validation across different timescales and highlights which design aspects critically enables our deep learning approach to capture both short- and long-term dynamics. We also show that this approach is scalable to other fish species.

animal behavior and cognition↗

bioRxiv2019

A data-driven method for reconstructing and modelling social interactions in moving animal groups

Group-living organisms that collectively migrate range from cells and bacteria to human crowds, and include swarms of insects, schools of fish and flocks of birds or ungulates. Unveiling the behavioural and cognitive mechanisms by which these groups coordinate their movements is a challenging task. These mechanisms take place at the individual scale and they can be described as a combination of pairwise interactions between individuals and interactions between these individuals and the physical obstacles in the environment. Thanks to the development of novel tracking techniques that provide large and accurate data sets, the main characteristics of individual and collective behavioural patterns can be quantified with an unprecedented level of precision. However, in a large number of works, social interactions are usually described by force map methods that only have a limited capacity of explanation and prediction, being rarely suitable for a direct implementation in a concise and explicit mathematical model. Here, we present a general method to extract the interactions between individuals that are involved in the coordination of collective movements in groups of organisms. We then apply this method to characterize social interactions in two species of shoaling fish, the rummynose tetra (Hemigrammus rhodostomus) and the zebrafish (Danio rerio), which both present a burst-and-coast motion. The detailed quantitative description of microscopic individual-level interactions thus provides predictive models of the emergent dynamics observed at the macroscopic group-level. This method can be applied to a wide range of biological and social systems.

animal behavior and cognition↗