bioRxiv Science⌕ Search

Biology subjects

Papakonstantinou, A.

Publications and source records attributed to Papakonstantinou, A..

2 recordsLinked to original sources

The invasions of Aedes aegypti and Aedes albopictus in Cyprus: current situation, risk modelling and public health implications for the wider Eastern Mediterranean region.

The Asian tiger mosquito, Aedes albopictus and the yellow fever mosquito, Aedes aegypti have been spreading worldwide and are reshaping the distribution of arboviruses. Both Aedes species have recently been observed in densely populated cities of Cyprus, a touristic island that is a historic bridge between Europe and Asia. Given the high public health stakes for Cyprus and the wider East Mediterranean region, the objectives of this study are three-fold. First, we present a novel delimitation strategy using spatially dense networks of ovitraps deployed in 500x500m cells in Limassol and Larnaca following the detection of Aedes species. Second, we use a dynamical vector model to estimate the potential of both species to spread further over Cyprus. Finally, we employ a basic reproduction number (R0) model to assess the potential transmission risk of arboviruses for the wider East Mediterranean region. Our results underline our delimitation strategys usefulness in delineating Ae. albopictus populations in Limassol and indicate the need for increased surveillance efforts for Ae. aegypti in Larnaca. Our vector model reveals that cities such as Nicosia, Paphos and Ayia Napa are climatically suitable for the establishment of both Ae. aegypti and Ae. albopictus. Finally, the R0 model captures historical hotspots of dengue transmission over the East Mediterranean region, with large R0 values simulated over Cyprus, Greece, Turkey, southern Italy and southern Spain. We recommend stringent vector surveillance at entry points in Greece and a rapid elimination in Cyprus to prevent the return of Ae. aegypti to the European continent.

ecology↗

Integrative multi-omics analysis reveals molecular subtypes and tumor evolution of synovial sarcoma

Synovial sarcomas (SS) are malignant mesenchymal tumors characterized by the SS18-SSX fusion gene, which drives tumorigenesis by altering the composition of the BAF complex. Secondary genomic alterations that determine variations in tumor phenotype or clinical presentation are largely unknown. Herein, we present transcriptome, targeted DNA-sequencing, and proteomics analysis of 91 synovial sarcomas from 55 patients. We identified three SS clusters (SSCs) characterized by distinct histology, tumor microenvironments, genomic complexities, therapeutic effects, and clinical outcomes. Eight BAF complex components are differentially expressed among SSCs, and their role in mesenchymal-epithelial-transition is supported by single cell sequencing. The epithelial cells of biphasic tumors are more susceptible to developing copy number alterations, including amplification of PDCD1 and TMPRSS2. Our findings explain broad concepts in SS biology and imply that the BAF composition at the start of the tumorigenesis (i.e. the cellular linage) may determine the SS subtype, providing a rationale for individualized treatment strategies.

cancer biology↗