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Orivel, J.

Publications and source records attributed to Orivel, J..

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Multiple Shifts from Peptide-Based to Metabolite-Based Venoms in Ants

Venom systems are key evolutionary innovations that have contributed to the ecological success of numerous animal lineages. In ants (Formicidae), venom exhibits an exceptional diversity in both chemical composition and delivery mechanisms. Here, we combine a synthesis of current knowledge on the evolution of ant venoms with new phylogenetic comparative analyses, integrating chemical, morphological, and phylogenetic data at the genus level. Comparative analyses across Formicidae support the hypothesis that peptide-rich venoms represent the ancestral condition in ants, as they are widely distributed across basal and derived lineages. Despite this ancestral state, we identify seven independent evolutionary transitions toward non-peptidic venom, occurring in major clades including Dolichoderinae, Formicinae, Stenammini, Solenopsidini, Crematogaster, Pheidole, and fungus-growing ants. Ancestral state reconstruction and tests of correlated evolution across 114 genera show that these seven shifts away from peptide-based venom were almost irreversible and tightly coupled with the loss of stinging capacity and a dietary shift away from predation. These transitions are consistently associated with profound morphological modifications of the venom apparatus, such as reduction or complete loss of the sting, or its transformation into non-injecting structures. Chemically, these systems are dominated by alkaloids, iridoids, formic acid, esters, and terpenoids. These repeated transitions reflect major ecological and evolutionary shifts. Lineages that rely less on individual predation and more on collective foraging or plant-based diets tend to exhibit reduced reliance on injectable peptide toxins. Instead, they favor metabolite-based venoms that can be co-opted from existing biochemical pathways and deployed in diverse ecological contexts. Conversely, peptide-rich venoms are retained in lineages subjected to strong selective pressures for rapid prey immobilization or defense against vertebrate predators. Overall, ants represent a unique model for understanding venom evolution, illustrating how shifts in chemistry, morphology, and ecological strategy can drive repeated and convergent innovations. Future integrative studies combining genomics, metabolomics, and functional assays will be essential to unravel the mechanisms underlying these transitions and their role in the extraordinary diversification of ants.

evolutionary biology↗

Viral infection patterns in ants are affected by colony structure and phylogenetic lineage

Across ant species, there are differences in how their societies are structured. Single-queened (monogynous) societies only have one reproducing queen in the colony, and new queens disperse and start colonies independently. In multiple-queened (polygynous) societies, the colony instead can contain several reproductive queens, and newborn queens often remain and reproduce within their natal colony. As a result, polygynous societies are comparatively larger, more genetically diverse, and can span large areas through several interconnected nests, whereas monogynous societies are typically smaller in scale. In this study, we investigated how these different social structures, as well as their phylogenetic lineage, affect the diversity (number of virus species per ant sample) and abundance (number of viral sequences per sample) of viruses in ants. We produced pooled RNA sequence libraries from 15 ant species, representing both monogynous and polygynous social structures, and the two largest ant subfamilies: Formicinae and Myrmicinae, with each library containing the RNA of up to 400 individual worker ants from a single population. We identified 168 virus species in total, of which 152 species were new to science. Out of these 168 viruses, 59 were active viruses based on the host immune response. We observed that polygynous ant species harbor a higher diversity of viruses and also tend to have higher virus abundance compared to monogynous species. Also, the ant subfamily Myrmicinae had a higher virus diversity than Formicinae. These findings highlight how social structure and evolutionary history shape viral diversity in ants.

genomics↗

Rainwash eDNA to monitor tropical rainforest biodiversity

Tropical rainforest canopies shelter an under-explored reservoir of biodiversity. In recent years, the amplification and sequencing of taxonomically informative DNA fragments from environmental samples (i.e. eDNA) has revolutionized biomonitoring. Here, we explore the potential of DNA contained in canopy throughfall water to sample the biological diversity of rainforest canopies. By sampling rainwash eDNA in two 1ha-plots, one mature Amazonian forest and a nearby tree plantation, we were able to detect 170 plant taxa, 72 vertebrate taxa including mammals, birds, and amphibians, and 313 insect taxa including e.g. mosquitoes, ants, beetles. The taxonomic composition retrieved in these two plots reflected their different disturbance status, and the plantation exhibited a much lower diversity. We also found that rainwash eDNA persists over ten days in passive eDNA collectors while providing a local picture of the diversity. This suggests that this method can be scaled up for a cost-effective environmental management of rainforest, and more generally of all forests canopies. TeaserRainwash DNA reveals the identity of plants, animals, and insects diversity, offering a practical tool for monitoring canopy biodiversity.

ecology↗

Adaptive trade-offs between vertebrate defense and insect predation drive ant venom evolution

Stinging ants have diversified into various ecological niches, and several evolutionary drivers may have contributed to shape the composition of their venom. To comprehend the drivers underlying venom variation in ants, we selected 15 Neotropical species and recorded a range of traits, including ecology, morphology, and venom bioactivity. Principal component analysis of both morphological and venom bioactivity traits revealed that stinging ants display two functional strategies. Additionally, phylogenetic comparative analysis indicated that venom function (predatory, defensive, or both) and mandible morphology significantly correlate with venom bioactivity and amount, while pain-inducing activity trades off with insect paralysis. Further analysis of the venom biochemistry of the 15 species revealed switches between cytotoxic and neurotoxic venom compositions in some species. This study highlights the fact that ant venoms are not homogenous, and for some species, there are major shifts in venom composition associated with the diversification of venom ecological functions. SignificanceVenoms are under severe evolutionary pressures, exerted either on the innovation of toxins or the reduction of the metabolic cost of production (1). To reduce the metabolic costs associated with venom secretion, some venomous animals can regulate venom expenditure by metering the amount of venom injected and by switching between offensive and defensive compositions (2-2). Many ants use venom for subduing a wide range of arthropod prey, as well as for defensive purposes against invertebrates and vertebrates, but are unable to adapt venom composition to stimuli (5, 6). Consequently, the expression of venom genes directly affects the ability of ants to interact with the biotic environment, and the venom composition may be fine-tuned to the ecology of each species. A previous study showed that defensive traits in ants exhibit an evolutionary trade-off in which the presence of a sting is negatively correlated with several other defensive traits, further supporting that trade-offs in defensive traits significantly constrain trait evolution and influence species diversification in ants (7). However, the sting is not used for the same purpose depending on the ant species. Our study supports an evolutionary trade-off between the ability of venom to deter vertebrates and to paralyze insects which are correlated with different life history strategies among Formicidae.

ecology↗

At each site its diversity: DNA barcoding reveals remarkable earthworm diversity in neotropical rainforests of French Guiana

Despite their recognized essential role in soil, earthworms in tropical environments are still understudied. The aim of this study was to re-evaluate the diversity at the regional scale, as well as to investigate the environmental and spatial drivers of earthworm communities. We sampled earthworm communities across a range of habitats at six locations in French Guiana using three different sampling methods. We generated 1675 DNA barcodes and combined them with data from a previous study. Together, all sequences clustered into 119 MOTUs which were used as proxy to assess species richness. Only two MOTUs were common between the six locations and 20.2 % were singletons, showing very high regional species richness and a high number of rare species. A canonical redundancy analysis was used to identify key drivers of the earthworm community composition. The RDA results and beta-diversity calculations both show strong species turnover and a strong spatial effect, resulting from dispersal limitations that are responsible for the current community composition. Sampling in different microhabitats allowed the discovery of 23 MOTUs that are exclusively found in decaying trunks and epiphytes, highlighting hidden diversity of earthworms outside of soil.

ecology↗