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Ohigashi, T.

Publications and source records attributed to Ohigashi, T..

3 recordsLinked to original sources

Population-level, state-dependent response as a trait predicting species redistribution under climate change

Species change their population sizes and distributions in response to fluctuating environments. Predicting such changes across space, particularly distributional shifts under climate change, is a central challenge in ecology and conservation1. Traditionally, static traits such as habitat preferences, or performance traits such as abundance-environment relationships, have been used to characterize species responses to the environment2,3. However, these approaches assume fixed relationships between species and their environments, overlooking the inherently state-dependent nature of ecosystems. Here, we show that population-level, state-dependent responses of species to environments can serve as a novel trait to better represent population dynamics in nature, which we term a dynamic response trait. Using nonlinear time-series analysis4,5 and long-term marine fish community data collected from Kyoto, Japan6, we identify causal influences of water temperature on about one hundred fish species. Species with higher latitudinal centers generally show negative dynamic responses to warming, whereas those with lower latitudinal centers show positive ones. Intriguingly, these dynamic response traits quantified at a single location explain the fish species poleward range shift velocities estimated from public biodiversity records; species with negative dynamic responses to warming shift poleward more rapidly, whereas those with positive ones tend to remain. Our findings establish dynamic response traits as a new dimension of trait-based ecology, capturing state-dependent species responses. By linking local population dynamics to broad-scale distributional shifts, this approach provides a powerful basis for guiding ecology and conservation under climate change.

ecology↗

Detection of environmental DNA of the Indo-Pacific humpback dolphins in Hong Kong waters using quantitative PCR

Environmental DNA (eDNA) analysis is a promising method to enhance the sensitivity and efficiency of biodiversity monitoring. In Hong Kong, the Indo-Pacific humpback dolphin (Sousa chinensis) is an iconic marine mammal inhabiting shallow coastal regions, playing a vital role in the local biodiversity. However, their population is declining, highlighting the need for effective monitoring methods for S. chinensis. In this study, we developed a species-specific qPCR assay for detecting S. chinensis eDNA. We designed primers and a probe targeting the Cytb region of mitochondrial DNA. Specificity tests and evaluations of the limit of detection and quantification demonstrated that the primers and probe possess sufficient specificity and sensitivity to detect S. chinensis eDNA. Our qPCR method was further validated by detecting S. chinensis eDNA in water samples collected from areas where S. chinensis individuals were sighted. Analysis of 56 coastal water samples collected over two seasons revealed that S. chinensis utilizes the western and southern Lantau regions of Hong Kong waters. With further enhancements to the eDNA-based survey method, including larger water volumes, broader spatial coverage, and targeting other cetaceans and fish, our framework will aid in the conservation of S. chinensis in Hong Kong waters.

ecology↗

Agricultural land use induces broader homogenization of soil microbial functional composition than taxonomic composition

Land-use changes from natural ecosystems to farmlands significantly alter soil functioning worldwide, especially challenging sub-Saharan Africa with rapid population growth and intensive agriculture. Soil microbial diversity is vital in supporting ecosystem multifunctionality and preventing pathogen growth. Recent studies have revealed that farming activities homogenize microbial communities across distant sites, which may lead to functional homogenization on that scale. However, given the redundancy of microbial functions, functional homogenization driven by farming may occur on a broader scale than taxonomic homogenization. We compared the taxonomic and functional compositions of soil prokaryotic and fungal communities between natural lands and farmlands at scales ranging from within-site ([~]200 m) to across-site ([~]1500 km) in Kenya and Malawi, using amplicon sequencing of 16S rRNA and ITS genes and the prediction of microbial functions. Soil microbial functional compositions were homogenized more broadly than taxonomic compositions in farmlands compared to natural lands, suggesting that similar functional responses to farming occur across scales where different taxa thrive. Furthermore, environmental factors predominantly influenced within-site homogeneity, whereas farming itself was a significant contributor to across-site homogeneity, indicating an overriding influence of farming compared to environmental variations. Additionally, pathogenic fungi were relatively more abundant in farmlands, likely due to reduced species competition and farming-induced environmental changes such as low soil pH. Our findings highlight the need to investigate microbial functional diversity alongside taxonomic diversity when assessing the impacts of land-use changes on soil health to develop sustainable land management strategies.

ecology↗