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Noronha, S. B.

Publications and source records attributed to Noronha, S. B..

2 recordsLinked to original sources

Structural insights and rational design of Pseudomonas putida KT2440 Omega transaminases for enhanced biotransformation of (R)-Phenylacetylcarbinol to (1R, 2S)-Norephedrine

Omega transaminases ({omega}-TAs) can mediate the chiral amination of several unnatural substrates without the requirement of an -COOH group, and are highly relevant in the production of several pharmaceutical intermediates of commercial interest. Development of better variants of {omega}-TAs are hence essential for their industrial uses. We have studied the active site architecture of the wild-type {omega}-TAs, to develop engineered enzymes for enhancing the biotransformation of (R)-Phenylacetylcarbinol to (1R, 2S)-Norephedrine. Two such {omega}-TAs (TA_5182 and TA_2799) from P. putida KT2440 strain were overexpressed and purified as recombinant proteins. Crystal structures of TA_5182 were solved in two conformations, and significant movements of two highly flexible loops were observed in these different states. The TA_2799 structure was determined in the co-factor bound state with a PLP molecule covalently bonded to the catalytic K286 as an internal aldimine. Enzyme assays indicated that TA_2799 required significantly higher concentrations of co-factor than TA_5182 to achieve satisfactory biotransformation of (R)-PAC. A key mutation of L322F in TA_2799 drastically reduced the co-factor dependency of the TA_2799_L322F mutant enzyme, and the mutant remained active for 96h at 30{degrees}C. The crystal structure of the mutant enzyme revealed an asparagine residue that mediates a hydrogen bonding network at the dimeric interface of the enzyme and is absent in TA_5182. The TA_5182_G119N mutant also showed enhanced co-factor affinity. The results of our studies will help generate Pseudomonad {omega}-TAs and {omega}-TAs from other organisms with high efficiency for asymmetric synthesis, to be used in host systems for optimal large-scale industrial biotransformation.

biochemistry↗

Template-assisted fabrication of moon-shaped channels for protein breakthrough analysis

Cylindrical column with packed stationary phase is the workhorse of liquid chromatography systems. These stationary phases are commonly classified on the basis of different form factors namely, beads and monoliths for protein chromatography. Monolithic rods are one of the important geometries derived from polymers through complex polymerization schemes with additional requirements such as cross-linkers and specific reaction conditions. To address these practical difficulties and enable ease of fabrication at laboratory scale, acrylic copolymers are hypothesized to perform as a monolithic stationary phase suitable for protein chromatography. The present work proposes a rapid fabrication technique to obtain monolithic rods that could be reconditioned without any of the above additional steps. It is characterized with monolith diameter that could be controlled using acrylic copolymer concentration. Formation of the copolymeric stationary phase inside microchannel led to annular geometry and in turn, demonstrated fabrication of moon-shaped channels (MSCs) for the first time in literature. An online monitoring system facilitated tracer breakthrough analysis with MSCs to report sharp peak front and an estimate of channel void volume. Breakthrough curves with single protein validated the selection of blue dextran as tracer and indicated retention of proteins due to electrostatic interactions on the functional copolymer surface.

biochemistry↗