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Niemi, A. J.

Publications and source records attributed to Niemi, A. J..

2 recordsLinked to original sources

Adenosine A2A and A2B receptor signaling in neurons promotes glucose and fatty acid release in the postprandial state

Adenosine is a widely distributed signaling molecule whose levels rise during conditions of metabolic stress, hypoxia, or inflammation. Adenosine is a homeostatic regulator of neuronal, cardiovascular, immune, and metabolic functions through activation of adenosine receptors. Here, we show that administration of adenosine rapidly elicits an immediate and pronounced excursion of glucose and non-esterified fatty acids (NEFA) in mice refed for four hours but is greatly attenuated in fasted mice. This adenosine-mediated postprandial response suggests that adenosine is a potent regulator of postprandial nutrient handling. Selective agonists and antagonists of A2A and A2B adenosine receptors demonstrate that activation of either is sufficient to evoke adenosines metabolic response, but both receptors must be inhibited simultaneously to abolish it. Adenosine strongly stimulates hepatic glucose production and adipose lipolysis, and this catabolic activity depends on sympathetic nerve activity as it requires autonomic signal transmission and is inhibited by blocking adrenergic receptors. Genetic ablation studies identify A2A and A2B receptors expressed on neurons, likely central neurons, as the primary site of action for mediating adenosines effects on whole-body metabolism. Collectively, these data demonstrate that acute adenosine administration promotes centrally mediated metabolic effects, particularly during the postprandial period. Rigorous dissection of signaling pathways shows that A2A and A2B receptors are individually sufficient and collectively necessary for adenosine-mediated glucose and fatty acid excursion.

physiology↗

Bifurcations and mutation hot-spots in the SARS-CoV-2 spike protein

Novel topological methods are introduced to protein research. The aim is to identify hot-spot sites where a bifurcation can change the local topology of the protein backbone. Since the shape of a protein is intimately related to its biological function, a mutation that takes place at such a bifurcation hot-spot has an enhanced capacity to change the proteins biological function. The methodology applies to any protein but it is developed with the SARS-CoV-2 spike protein as a timely example. First, topological criteria are introduced to identify and classify potential mutation hot-spot sites along the protein backbone. Then, the expected outcome of a substitution mutation is estimated for a general class of hot-spots, by a comparative analysis of the backbone segments that surround the hot-spot sites. This analysis employs the statistics of commensurable amino acid fragments in the Protein Data Bank, in combination with general stereochemical considerations. It is observed that the notorious D614G substitution of the spike protein is a good example of such a mutation hot-spot. Several topologically similar examples are then analyzed in detail, some of them are even better candidates for a mutation hot-spot than D614G. The local topology of the recently observed N501Y mutation is also inspected, and it is found that this site is prone to a different kind of local topology changing bifurcation.

biophysics↗