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Niemann, H. H.

Publications and source records attributed to Niemann, H. H..

2 recordsLinked to original sources

Single-molecule FRET-tracking of InlB-activated MET receptors in living cells

The activation of transmembrane receptors through the binding of external ligands initiates information transfer across the cell membrane. Understanding these processes requires observations in living cells. Given the heterogeneity and lack of synchronization of such events, single-molecule experiments are required to resolve distinct sub-populations. Here, single-molecule FRET microscopy and single-particle tracking are combined to track the ligand-induced dimerization and activation of the MET receptor tyrosine kinase in the plasma membrane of living cells. First, using fluorophore-labeled variants of the MET ligand internalin B (InlB), the lifetime of a ligand-activated dimeric (MET:InlB)2 receptor complex is determined to be around 1 second. Next, diffusion coefficients of monomeric and dimeric MET:InlB complexes are extracted from single-molecule FRET trajectories, revealing an approximately 1.6-fold slower diffusion of the dimeric receptor compared to the monomeric receptor, accompanied by spatially restricted motion. The combination of single-molecule FRET and single-particle tracking provides essential biophysical parameters of membrane receptor activation in living cells.

biophysics↗

Single-molecule FRET and molecular dynamics simulations reveal early activation steps of MET receptor by Listeria monocytogenes

The assembly of membrane receptors into signaling complexes is at the origin of key cellular events. Yet, we often lack detailed structural mechanistic understanding. Receptors are embedded into a complex cellular membrane, which defines their dynamics but also complicates their experimental characterizations significantly. Here, we showcase an integrative structural biology approach to investigate the activation mechanism of the human growth factor receptor MET. MET is a receptor tyrosine kinase involved in cell proliferation, migration, and survival. MET is also hijacked by the intracellular pathogen Listeria monocytogenes. Its invasion protein, internalin B (InlB), binds to MET and promotes the formation of a signaling dimer that triggers the internalization of the pathogen. Crystallography had suggested two different 2:2 MET:InlB complexes. Here, we use a combination of structural biology, modeling, molecular dynamics simulations, and in situ single-molecule Forster resonance energy transfer (smFRET) to elucidate the early events in MET activation. Simulations show that InlB binding stabilizes MET in a conformation that promotes dimer formation. smFRET identifies the organization of the in situ signaling dimer, which resembles one of the two crystal structures yet shows differences. Further MD simulations resulted in a refinement of the dimer model, which is in quantitative agreement with smFRET results. We accurately describe the structural dynamics underpinning an important cellular event and introduce a powerful methodological pipeline applicable to studying the activation of other plasma membrane receptors in situ.

biophysics↗