bioRxiv ScienceSearch

Biology subjects

Nichols, S. A.

Publications and source records attributed to Nichols, S. A..

2 recordsLinked to original sources

β-catenin has both conserved and novel functions in the sponge Ephydatia muelleri

{beta}-catenin acts as a transcriptional co-activator in the Wnt/{beta}-catenin signaling pathway and a cytoplasmic effector in cadherin-based cell adhesion. These functions are ancient within animals, but the earliest steps in {beta}-catenin evolution remain unresolved due to limited data from key lineages - sponges, ctenophores and placozoans. Previous studies in sponges have characterized {beta}-catenin expression dynamics and used GSK3B antagonists to ectopically activate the Wnt/{beta}-catenin pathway; both approaches rely upon untested assumptions about the conservation of {beta}-catenin function and regulation in sponges. Here, we test these assumptions using an antibody raised against {beta}-catenin from the sponge Ephydatia muelleri. We find that cadherin-complex genes co-precipitate with endogenous Em {beta}-catenin from cell lysates, but that Wnt pathway components do not. However, through immunostaining we detect both cell boundary and nuclear populations, and we find evidence that Em {beta}-catenin is a conserved substrate of GSK3B. Collectively, these data support conserved roles for Em {beta}-catenin in both cell adhesion and Wnt signaling. Additionally, we find evidence for an Em {beta}-catenin population associated with the distal ends of F-actin stress fibers in apparent cell-substrate adhesion structures that resemble focal adhesions. This finding suggests a fundamental difference in the adhesion properties of sponge tissues relative to other animals, in which the adhesion functions of {beta}-catenin are typically restricted to cell-cell adhesions.

evolutionary biology

Transcriptome sequencing and delimitation of cryptic Oscarella species (O. carmela and O. pearsei sp. nov) from California, USA.

The homoscleromorph sponge Oscarella carmela, first described from central California, USA is shown to represent two morphologically similar but phylogenetically distant species that are co-distributed. We here describe a new species as Oscarella pearsei, sp. nov. and redescribe Oscarella carmela; the original description was based upon material from both species. Further, we correct the identification of published genomic/transcriptomic resources that were originally attributed to O. carmela, and present new Illumina-sequenced transcriptome assemblies for each of these species, and the mitochondrial genome sequence for O. pearsei sp. nov. Using SSU and LSU ribosomal DNA and the mitochondrial genome, we report the phylogenetic relationships of these species relative to other Oscarella species, and find strong support for placement of O. pearsei sp. nov. in a clade defined by the presence of spherulous cells that contain paracrystalline inclusions; O. carmela lacks this cell type and is most closely related to the Western Pacific species, O. malakhovi. Oscarella pearsei sp. nov and O. carmela can be tentatively distinguished based upon gross morphological differences such as color, surface texture and extent of mucus production, but can be more reliably identified using mitochondrial and nuclear barcode sequencing, ultrastructural characteristics of cells in the mesohyl, and the morphology of the follicle epithelium which surrounds the developing embryo in reproductively active individuals. Usually, cryptic species are very closely related to each other, but in this case and in sponges generally, cryptic species may be very distantly related because sponges can be difficult to identify based upon gross morphological characteristics.

evolutionary biology