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Nichols, J. A.

Publications and source records attributed to Nichols, J. A..

2 recordsLinked to original sources

A Musculoskeletal Model of the Hand and Wrist Capable of Simulating Functional Tasks

ObjectiveThe purpose of this work was to develop an open-source musculoskeletal model of the hand and wrist and to evaluate its performance during simulations of functional tasks. MethodsThe musculoskeletal model was developed by adapting and expanding upon existing musculoskeletal models. An optimal control theory framework that combines forward-dynamics simulations with a simulated-annealing optimization was used to simulate maximum grip and pinch force. Active and passive hand opening were simulated to evaluate coordinated kinematic hand movements. ResultsThe models maximum grip force production matched experimental measures of grip force, force distribution amongst the digits, and displayed sensitivity to wrist flexion. Simulated lateral pinch strength fell within variability of in vivo palmar pinch strength data. Additionally, predicted activation for 7 of 8 muscles fell within variability of EMG data during palmar pinch. The active and passive hand opening simulations predicted reasonable activations and demonstrated passive motion mimicking tenodesis, respectively. ConclusionThis work advances simulation capabilities of hand and wrist models and provides a foundation for future work to build upon. SignificanceThis is the first open-source musculoskeletal model of the hand and wrist to be implemented during both functional kinetic and kinematic tasks. We provide a novel simulation framework to predict maximal grip and pinch force which can be used to evaluate how potential surgical and rehabilitation interventions influence these functional outcomes while requiring minimal experimental data.

bioengineering↗

Diversity and Divergence: Evolution of defense chemistry in the tropical tree genus Inga

O_LIPlants are widely recognized as chemical factories, with each species producing dozens to hundreds of unique secondary metabolites. These compounds shape the interactions between plants and their natural enemies. Here we explore how plants generate chemical diversity, and what evolutionary processes have led to novel compounds and unique chemical profiles. C_LIO_LIWe comprehensively characterized the chemical profile of one-third of the species of tropical rainforest trees in the genus Inga ([~] 100, Fabaceae) and applied phylogenetic comparative methods to understand the mode of chemical defense evolution. C_LIO_LIWe show that: 1) Each Inga species produces exceptionally high levels of phytochemical diversity, despite costs, tradeoffs and biosynthetic constraints. 2) Closely related species have highly divergent defense profiles, with individual compounds, major compound classes and complete profiles showing little to no phylogenetic signal. 3) We show that the evolution of a species chemical profile shows a signature of divergent adaptation, implying that it is advantageous for a species to have distinct chemistry from close relatives to avoid shared natural enemies. 4) Finally, we hypothesize a model where deep homology of biosynthetic pathways and rapid changes in regulatory mechanisms may better explain the observed large shifts in defense chemicals between closely related taxa. C_LI

evolutionary biology↗