Biology subjects

Naves, M.

Publications and source records attributed to Naves, M..

3 recordsLinked to original sources

bioRxiv2025

Prevalence of Heartwater in Guadeloupe (2024): Stable endemicity and Evidence of Spread to Les Saintes

Heartwater is a tick-borne disease caused by Ehrlichia ruminantium and remains endemic in the Guadeloupe archipelago. While previous data from 1989 suggested a seroprevalence of 22% in cattle, no updated figures were available for livestock, and certain islands such as Les Saintes were considered disease-free. This study aimed to update the sero-epidemiological status of heartwater in cattle and goats across Guadeloupe in 2024. Blood samples were collected from 261 cattle and 135 goats from all islands. Serological testing using the MAP1B ELISA was performed, and true seroprevalence was estimated using a simplified stochastic model that accounts for test sensitivity, specificity, and sample uncertainty. The mean cattle seroprevalence was estimated at 28% (95% CI [22-34%]), with no significant differences between Basse-Terre, Grande-Terre, and Marie-Galante. Importantly, seropositive goats were identified on all major islands, including Les Saintes. Our findings suggest that heartwater remains endemically stable in Guadeloupe since the 1980s and reveal for the first time its serological presence in Les Saintes. These results emphasize the importance of strengthening regional surveillance systems, including veterinary reporting, serological monitoring, and coordinated efforts to prevent further spread across the Caribbean.

immunology↗

bioRxiv2023

Genomic reconstruction of the successful establishment of a feralized bovine population on the subantarctic island of Amsterdam

The feral cattle of the subantarctic island of Amsterdam provide an outstanding case study of a large mammalian population that was established by a handful of founders and thrived within a few generations in a seemingly inhospitable environment. Here, we investigated the genetic history and composition of this population using genotyping and sequencing data. Our inference showed an intense but brief founding bottleneck around the late 19th century and revealed contributions from European taurine and Indian Ocean zebu in the founder ancestry. Comparative analysis of whole genome sequences further revealed a moderate reduction in genetic diversity despite high levels of inbreeding. The brief and intense bottleneck was associated with high levels of drift, a flattening of the site frequency spectrum and a slight relaxation of purifying selection on mildly deleterious variants. However, we did not observe any significant purge of highly deleterious variants. Interestingly, the populations success in the harsh environment can be attributed to pre-adaptation from their European taurine ancestry, suggesting no strong bioclimatic challenge, and also contradicting evidence for insular dwarfism. Genome scan for footprints of selection uncovered a majority of candidate genes related to nervous system function, likely reflecting rapid feralization driven by behavioral changes and complex social restructuring. This unprecedented case study provides valuable insights into rapid population establishment, feralization, and genetic adaptation in challenging environments. It highlights the importance of preserving the unique genetic legacies of feral populations and raises ethical questions in the eyes of conservation efforts.

evolutionary biology↗

bioRxiv2021

The genetic history of Mayotte and Madagascar cattle breeds mirrors the complex pattern of human exchanges in Western Indian Ocean

Despite their central economic and cultural role, the origin of cattle populations living in Indian Ocean islands still remains poorly documented. Here, we unravel the demographic and adaptive histories of the extant Zebus from the Mayotte and Madagascar islands using high-density SNP genotyping data. We found that these populations are very closely related and both display a predominant indicine ancestry. They diverged in the 16th century at the arrival of European people who transformed the trade network in the area. Their common ancestral cattle population originates from an admixture between an admixed African zebu population and an Indian zebu that occurred around the 12th century at the time of the earliest contacts between human African populations of the Swahili corridor and Austronesian people from Southeast Asia in Comoros and Madagascar. A steep increase of the estimated population sizes from the beginning of the 16th to the 17th century coincides with the expansion of the cattle trade. By carrying out genome scans for recent selection in the two cattle populations from Mayotte and Madagascar, we identified sets of candidate genes involved in biological functions (cancer, skin structure and UV-protection, nervous system and behavior, organ development, metabolism and immune response) broadly representative of the physiological adaptation to tropical conditions. Overall, the origin of the cattle populations from Western Indian Ocean islands mirrors the complex history of human migrations and trade in this area.

evolutionary biology↗