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Biology subjects

Nanduri, N.

Publications and source records attributed to Nanduri, N..

2 recordsLinked to original sources

Intra-African Geographic Domain Shift in Wildlife Camera Trap Species Classification: A Comparative Study of Supervised and Zero-Shot Foundation Models

Camera trap networks such as Snapshot Safari have generated millions of labelled wildlife images across Africa, enabling the training of deep learning models for automated species classification. However, deploying models trained in one African region to another remains poorly understood. To the best of our knowledge, this study presents the first systematic evaluation of geographic domain shift within the African continent for wildlife camera trap species classification, using the Machine Learning sub-field of Artificial Intelligence. We use three model architectures, each interacting with Snapshot Serengeti in a different way: BEiTV2 is fine-tuned on Serengeti images as a supervised baseline; DINOv2 with FAISS uses Serengeti images as a retrieval index without any weight updates; and BioCLIP is a true zero-shot foundation model that receives no Serengeti training data at all. All three are then evaluated on two Southern African test sets--Snapshot Kgalagadi and Snapshot Kruger --as well as on locally collected wildlife photographs from Botswana. We conduct eight experiments covering in-domain baselines, cross-dataset transfer, data scaling, MegaDetector preprocessing, grayscale vs. colour image conditions, and per-species transfer analysis. This work provides the first empirical characterisation of intra-African domain shift across both supervised and zero-shot architectures, and offers practical guidance for conservation AI practitioners who need to deploy models across the diverse ecosystems of Southern Africa without collecting new labelled data.

ecology↗

CGRP reception potentiates anxiety in an influenza A derived immune engram

An immune engram is a recently described phenomenon in which neuronal populations encode functional aspects of an immune challenge. Here we investigate an immune engram arising from respiratory infection with influenza A virus, demonstrating a molecular mechanism with differential influence over behavioral and immunological aspects of the engram. We first define a cellular response to acute non-neurotropic influenza A/Puerto Rico/8/1934 (PR8) infection by mapping cFos+ cells and microglia morphology across brain regions. In the posterior insula, this response has an early peak at 3 days post infection. Using a cre-dependent excitatory chemogenetic system in TRAP2 mice, we capture an engram at this same region and infection timepoint. Activation of this PR8 engram results in anxiety behavior and increased transcriptional expression of cytokines in lung tissue but not spleen tissue. We further explore how pulmonary signals contribute to this PR8 engram. Using tissue-specific, cre-dependent expression of diphtheria toxin fragment in Calcacre mice, we ablate Calca-expressing cells including pulmonary neuroendocrine cells in respiratory tissue. Loss of Calca-expressing cells prevents changes in synaptic engulfment by microglia in the insula during PR8 infection without altering the cellular response to infection in pulmonary tissue. Signaling of calcitonin gene related peptide (CGRP), a peptide encoded by Calca, can be blocked with the small molecule CGRP receptor antagonist rimegepant. Using rimegepant during acute PR8 infection we again demonstrate that loss of Calca signaling prevents the cellular response to PR8 infection in the insula. Finally, applying rimegepant alongside the chemogenetic system in TRAP2 mice we show that CGRP receptor antagonism during engram formation prevents anxiety behavior but not peripheral gene expression changes resulting from PR8 engram activation.

neuroscience↗