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Najjari, A.

Publications and source records attributed to Najjari, A..

2 recordsLinked to original sources

Acinetobacter guillouiae strain isolated from sludge capable of partially degrade polyethylene terephthalate: genomic and biochemical insights

The escalating accumulation of plastic waste in terrestrial and aquatic ecosystems profoundly threatens environmental health and biodiversity while impacting human well-being. Recently, many microorganisms capable of degrading polyethylene terephthalate (PET) have been reported, primarily sourced from terrestrial soils and marine environments. Notably, the challenge of PET pollution in aquatic environments has remained a persistent research concern. In this study, we present the isolation and characterization of Acinetobacter guillouiae strain I-MWF, obtained from a wastewater treatment plant in Makri, AJK, Pakistan, using molecular phylogenetic analysis based on genome sequencing. Results revealed that this strain exhibits the ability for PET powder degradation, as confirmed by HPLC/LCMS analysis. Furthermore, we conducted whole-genome sequencing using Illumina technology and bioinformatically explored this strains potential repertoire of lipase and esterase enzymes. Under optimized conditions of 23{degrees}C and pH 7 in mineral salt media with PET powder as the sole organic substrate, A. guillouiae I-MWF could degrade partially. Extracellular enzymes yielded PET depolymerization products identified as mono(2- hydroxyethyl) terephthalic acid and terephthalic acid. The sequenced genome of this strain spans 4.61 Mb with a mean G + C content of 38.2%, containing 4,178 coding genes, 71 tRNA, and six rRNA genes. Although no cutinase-like enzymes were identified, our analysis unveiled a diverse array of putative lipases and three esterases, all sharing the typical /{beta} hydrolase fold. Additionally, comprehensive molecular modelling analysis suggested that some of the 18 identified extracellular hydrolases may be involved in polyester enzymatic depolymerization processes.

microbiology↗

Metataxonomic analysis of halophilic archaea community in two geothermal springs sources in southern Tunisian Sahara

In this study, we assess the phylogenetic diversity of the halophilic archaeal community of biotechnological interest that inhabit in geothermal water in southern Tunisia. These waters are usually used for farming purposes, particularly for irrigation of the oases and greenhouses, due to the limited availability of surface freshwater resources and the arid climate. The samples processed from two separated geothermal sources in southern Tunisia based on the Illumina Miseq sequencing approach. Three samples including water, sediment, and halite-soil crust, were collected from downstream of two geothermal springs of Ksar Ghilane (KGH) and Zaouet Al Aness (ZAN) oases. Results showed that several haloarchaea-related members were identified in geothermal springs. The average taxonomic composition showed that 20 genera out of 33 were shared between the two geothermal sources with uneven distribution, where the Halogranum genus is the most represented genus with an abundance of 18.9% and 11.58% for ZAW and KGH, respectively. Several unique site-specific genera were also observed; the case of Halonotius, Halopelagius, Natronorubrum, and Haloarcula in ZAN, and Haloprofundus, Halomarina, Halovivax, Haloplanus, Natrinema, Halobium, Natronoarchaeum, Haloterrigena detected in KGH pool. We noticed that the majority of genus members are usually found in low-salinity ecosystems. The finding of this study suggests that haloarchaea-related members could survive in downstream geothermal sources, which may have resulted from the leaching of salts and minerals through drilling waters creating chemically complex saline systems.

microbiology↗