Biology subjects

Mwangi, D.

Publications and source records attributed to Mwangi, D..

3 recordsLinked to original sources

bioRxiv2025

BetaH proteolysis unleashes an electrostatic-homing antibacterial polymorphic toxin

Contact-dependent or diffusible proteinaceous polymorphic toxin systems (PTSs) mediate widespread bacterial competition. While bioinformatic analyses have identified diverse PTSs across bacterial phyla, experimental validation in Gram-positive species remains limited. Here, we characterize a diffusible PTS encoded by the Staphylococcus aureus S8-Ntox35 locus. We demonstrate that this system mediates inter-genus antagonism against Listeria monocytogenes via a bactericidal, heat-labile protein, and that toxicity depends on extracellular cleavage of the BetaH domain by an S8 peptidase. This processed peptide resembles a cationic antimicrobial peptide (CAMP) and facilitates intoxication of target cells by the Ntox35 RNase domain. Target cell resistance is impacted by known CAMP defense pathways, including DltABCD and MprF, and experimental evolution identified the ABC transporter AnrAB as essential for intoxication. Unexpectedly, disruption of AnrAB abolished Ntox35 susceptibility, while simultaneously sensitizing cells to the proposed CAMP like activity of the processed BetaH domain. These findings reveal a novel mechanism of inter-genus antagonism among Firmicutes and establish a functional role for extracellular processing and ABC transporter-mediated susceptibility in PTS activity. Our work expands the known repertoire of diffusible toxins in Gram-positive bacteria and sets the foundation for broader ecological and mechanistic investigation of S8-PTS systems. SignificancePolymorphic toxin systems (PTSs) are widely used by bacteria to inhibit competitors, but diffusible proteinaceous toxins have been largely characterized in Gram-negative species. Here, we identify and mechanistically characterize a diffusible PTS in Staphylococcus aureus that mediates inter-genus antagonism in the Firmicutes phylum. This system employs a secreted S8 peptidase to cleave a BetaH-toxin fusion, releasing a previously caged cationic amphipathic -helix that facilitates membrane targeting and intoxication of susceptible cells. We further show that toxin activity requires the target cell ABC transporter AnrAB, revealing a novel route of entry and an evolutionary tradeoff between toxin susceptibility and antimicrobial resistance. Together, these findings uncover a new mode of bacterial competition and highlight a broadly distributed toxin system with ecological relevance across Firmicutes.

microbiology↗

bioRxiv2024

Circadian rhythms of macrophages are altered by the acidic pH of the tumor microenvironment

Macrophages are prime therapeutic targets due to their pro-tumorigenic and immunosuppressive functions in tumors, but the varying efficacy of therapeutic approaches targeting macrophages highlights our incomplete understanding of how the tumor microenvironment (TME) can influence regulation of macrophages. The circadian clock is a key internal regulator of macrophage function, but how circadian rhythms of macrophages may be influenced by the tumor microenvironment remains unknown. We found that conditions associated with the TME such as polarizing stimuli, acidic pH, and elevated lactate concentrations can each alter circadian rhythms in macrophages. Circadian rhythms were enhanced in pro-resolution macrophages but suppressed in pro-inflammatory macrophages, and acidic pH had divergent effects on circadian rhythms depending on macrophage phenotype. While cyclic AMP (cAMP) has been reported to play a role in macrophage response to acidic pH, our results indicate that pH-driven changes in circadian rhythms are not mediated solely by the cAMP signaling pathway. Remarkably, clock correlation distance analysis of tumor-associated macrophages (TAMs) revealed evidence of circadian disorder in TAMs. This is the first report providing evidence that circadian rhythms of macrophages are altered within the TME. Our data further suggest that heterogeneity in circadian rhythms at the population level may underlie this circadian disorder. Finally, we sought to determine how circadian regulation of macrophages impacts tumorigenesis, and found that tumor growth was suppressed when macrophages had a functional circadian clock. Our work demonstrates a novel mechanism by which the tumor microenvironment can influence macrophage biology through altering circadian rhythms, and the contribution of circadian rhythms in macrophages to suppressing tumor growth.

immunology↗

bioRxiv2023

MYC disrupts transcriptional and metabolic circadian oscillations in cancer and promotes enhanced biosynthesis

The molecular circadian clock, which controls rhythmic 24-hour oscillation of genes, proteins, and metabolites in healthy tissues, is disrupted across many human cancers. Deregulated expression of the MYC oncoprotein has been shown to alter expression of molecular clock genes, leading to a disruption of molecular clock oscillation across cancer types. It remains unclear what benefit cancer cells gain from suppressing clock oscillation, and how this loss of molecular clock oscillation impacts global gene expression and metabolism in cancer. We hypothesized that MYC or its paralog N-MYC (collectively termed MYC herein) suppress oscillation of gene expression and metabolism to upregulate pathways involved in biosynthesis in a static, non-oscillatory fashion. To test this, cells from distinct cancer types with inducible MYC were examined, using time-series RNA-sequencing and metabolomics, to determine the extent to which MYC activation disrupts global oscillation of genes, gene expression pathways, and metabolites. We focused our analyses on genes, pathways, and metabolites that changed in common across multiple cancer cell line models. We report here that MYC disrupted over 85% of oscillating genes, while instead promoting enhanced ribosomal and mitochondrial biogenesis and suppressed cell attachment pathways. Notably, when MYC is activated, biosynthetic programs that were formerly circadian flipped to being upregulated in an oscillation-free manner. Further, activation of MYC ablates the oscillation of nutrient transporter proteins while greatly upregulating transporter expression, cell surface localization, and intracellular amino acid pools. Finally, we report that MYC disrupts metabolite oscillations and the temporal segregation of amino acid metabolism from nucleotide metabolism. Our results demonstrate that MYC disruption of the molecular circadian clock releases metabolic and biosynthetic processes from circadian control, which may provide a distinct advantage to cancer cells.

cancer biology↗