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Mullane, K. K.

Publications and source records attributed to Mullane, K. K..

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Low Temperature and High Hydrostatic Pressure Have Compounding Negative Effects on Marine Microbial Motility

Approximately three fourths of all pelagic marine prokaryotes live in the deep-sea, an environment characterized by low temperature and high hydrostatic pressure. Within deep-sea environments labile organic matter is often scarce and motility can serve as a competitive advantage for microorganisms. Experimental work with a handful of species suggests motility is one of the most temperature- and pressure-sensitive cellular processes, however the combined effects of temperature and pressure together have yet to be investigated in detail. Here we employed growth-dependent motility agar assays and growth-independent microscopy assays to assess how changes in these two physical factors impact motility both individually and in combination, using ecologically relevant model organisms from the cosmopolitan genera Halomonas, Alcanivorax, and Marinobacter. At pressures equivalent to bathyal and abyssal depths, changes in temperature from 30{degrees}C to 4{degrees}C (motility assays) or 23{degrees}C to 7{degrees}C (microscopy assays) had a greater influence on motility than pressure. In addition, low-temperature and high-pressure impacts were additive. Exposure to high pressure had varying degrees of effect on flagellar function, depending on the strain and the magnitude of the pressure. These ranged from short-term impacts that were quickly reversible to long-term impacts that were detrimental to the function of the flagellum, leading to complete loss of motility. These findings highlight the sensitivity of deep-sea bacterial motility systems to combined temperature/pressure conditions, phenotypes that will contribute to the modulation of diverse microbial activities at depth. IMPORTANCEMicroorganisms perform critical functions in biogeochemical cycles at depth, as well as likely modulating the carbon sequestration potential of the deep ocean. However, their activities under in situ conditions are poorly constrained. One aspect of microbial activity is motility, generally mediated by the energy-consuming rotation of one or more flagellar filaments that enables swimming behavior. This provides a competitive advantage for microbes in the environment, such as by enhancing nutrient acquisition. Here we report on culture-based and microscopy-based analyses of pressure-temperature (P-T) effects on the motility of three ecologically relevant marine microbes. The results in all cases indicate that high pressure and low temperature exert compounding inhibitory effects. This argues for the need for further investigations into P-T effects on deep-sea microbial processes.

microbiology↗

Distinctive Gene and Protein Characteristics of Extremely Piezophilic Colwellia

BackgroundThe deep ocean is characterized by low temperatures, high hydrostatic pressures, and low concentrations of organic matter. While these conditions likely select for distinct genomic characteristics within prokaryotes, the attributes facilitating adaptation to the deep ocean are relatively unexplored. In this study, we compared the genomes of seven strains within the genus Colwellia, including some of the most piezophilic microbes known, to identify genomic features that enable life in the deep sea. ResultsSignificant differences were found to exist between piezophilic and non-piezophilic strains of Colwellia. Piezophilic Colwellia have a more basic and hydrophobic proteome. The piezophilic abyssal and hadal isolates have more genes involved in replication/recombination/repair, cell wall/membrane biogenesis, and cell motility. The characteristics of respiration, pilus generation, and membrane fluidity adjustment vary between the strains, with operons for a nuo dehydrogenase and a tad pilus only present in the piezophiles. In contrast, the piezosensitive members are unique in having the capacity for dissimilatory nitrite and TMAO reduction. A number of genes exist only within deep-sea adapted species, such as those encoding d-alanine-d-alanine ligase for peptidoglycan formation, alanine dehydrogenase for NADH/NAD+ homeostasis, and archaeal methyltransferase for tRNA modification. Many of these piezophile-specific genes are in variable regions of the genome near genomic islands, transposases, and toxin-antitoxin systems. ConclusionsWe identified a number of adaptations that may facilitate deep-sea radiation in members of the genus Colwellia, as well as in other piezophilic bacteria. An enrichment in more basic and hydrophobic amino acids could help piezophiles stabilize and limit water intrusion into proteins as a result of high pressure. Variations in genes associated with the membrane, including those involved in unsaturated fatty acid production and respiration, indicate that membrane-based adaptations are critical for coping with high pressure. The presence of many piezophile-specific genes near genomic islands highlights that adaptation to the deep ocean may be facilitated by horizontal gene transfer through transposases or other mobile elements. Some of these genes are amenable to further study in genetically tractable piezophilic and piezotolerant deep-sea microorganisms.

microbiology↗