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McLaren, J. D.

Publications and source records attributed to McLaren, J. D..

2 recordsLinked to original sources

Inherited geomagnetic signposts can maintain migratory detours in changing geomagnetic landscapes

BackgroundFor many migratory species, inexperienced (naive) individuals reach remote nonbreeding areas independently using one or more inherited compass headings and, potentially, magnetic signposts to gauge where to switch between compass headings. Inherited magnetic-based migratory orientation programs have not yet been assessed as a population-level process, particularly where strong geomagnetic spatial gradients or long-term shifts could create mismatches with inherited magnetic headings. In particular, it remains unstudied whether and how, under natural selection, inherited headings and signposts could potentially adapt to long-term geomagnetic shifts. MethodsTo address these unknowns, we modelled bird migration using an evolutionary algorithm incorporating global geomagnetic data (1900-2023). Modelled population mixing incorporated both natal dispersal and trans-generational inheritance of magnetic headings and signposts, the latter including intrinsic (stochastic) variability. Using the model, we assessed robustness of signposted and non-signposted trans-hemispheric songbird migration across a rapidly magnetically-shifting Nearctic breeding region (mean 34{degrees} declination shift) via Europe to Africa. ResultsModel-evolved magnetic-signposted migration was (i) overall successful throughout the 124-year period, with 60-90% mean successful arrival across a broad range in plausible compass precision, (ii) through reduced trans-Atlantic flight distances, up to twice as successful compared with non-signposted migration, but (iii) to avoid evolving unsustainable open-ocean flights, intrinsic variability in inheritance of magnetic headings was required (model-evolved {sigma} {approx} 2.6{degrees} standard error in inherited headings). ConclusionsOur study supports the potential long-term viability of inherited magnetic migratory headings and signposts, and illustrates more generally how inherited migratory programs can both mediate and constrain evolution of routes, in response to global environmental change.

ecology↗

Across atoms to crossing continents: Application of similarity measures to biological location data

Biological processes involve movements across all measurable scales. Similarity measures can be applied to compare and analyze these movements but differ in how differences in movement are aggregated across space and time. The present study reviews frequently-used similarity measures, such as the Hausdorff distance, Frechet distance, Dynamic Time Warping, and Longest Common Subsequence, jointly with several measures less used in biological applications (Wasserstein distance, weak Frechet distance, and Kullback-Leibler divergence), and provides computational tools for each of them that may be used in computational biology. We illustrate the use of the selected similarity measures in diagnosing differences within two extremely contrasting sets of biological data, which, remarkably, may both be relevant for magnetic field perception by migratory birds. Specifically, we assess and discuss cryptochrome protein conformational dynamics and extreme migratory trajectories of songbirds between Alaska and Africa. We highlight how similarity measures contrast regarding computational complexity and discuss those which can be useful in noise elimination or, conversely, are sensitive to spatiotemporal scales.

bioinformatics↗