bioRxiv Science⌕ Search

Biology subjects

McCollum, C. O.

Publications and source records attributed to McCollum, C. O..

2 recordsLinked to original sources

The viral packaging motor potentiates late gene expression in Kaposi's sarcoma-associated herpesvirus

{beta}- and {gamma}-herpesviruses transcribe their late genes in a manner distinct from host transcription. This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled with mass spectrometry, followed by CRISPR and siRNA screening to identify proteins functionally associated with the Kaposis sarcoma-associated herpesvirus (KSHV) late gene transcriptional complex. These data revealed that the catalytic subunit of the viral DNA packaging motor, ORF29, is both dynamically associated with the viral transcriptional activator complex and potentiates late gene expression. Through genetic mutation and deletion of ORF29, we establish that its catalytic activity potentiates viral transcription and is required for robust accumulation of essential late proteins during infection. Thus, we propose an expanded role for ORF29 that encompasses its established function in viral packaging and its newly discovered contributions to viral transcription and late gene expression in KSHV. Author summary{beta}- and {gamma}-herpesviruses express a class of genes essential for completion of the viral life cycle late during infection. A specialized complex of viral transcriptional activator proteins drives expression of these late genes in a manner dependent on viral genome replication, although the mechanisms and regulation of this process are largely unknown. Here, we identified factors that physically and functionally associate with the late gene transcription complex and unexpectedly found that the viral DNA packaging motor in Kaposis sarcoma-associated herpesvirus (KSHV) contributes to late gene expression. We show that the catalytic activity of this protein is not only required for genomic packaging but also for the robust expression of late genes to ensure the successful production of progeny virions. Thus, late gene transcription is mechanistically linked to the conserved processes of viral genome replication and packaging.

molecular biology↗

The γ-herpesviral TATA box binding protein directly interacts with RNA Polymerase II to direct late gene transcription

{beta}- and {gamma}-herpesviruses include the oncogenic human viruses Kaposis sarcoma-associated virus (KSHV) and Epstein-Barr virus (EBV), and human cytomegalovirus (HCMV), which is a significant cause of congenital disease. Near the end of their replication cycle, these viruses transcribe their late genes in a manner distinct from host transcription. Late gene transcription requires six virally-encoded proteins, one of which is a functional mimic of host TATA-box-binding protein (TBP) that is also involved in recruitment of RNA polymerase II (Pol II) via unknown mechanisms. Here, we applied biochemical protein interaction studies together with electron microscopy-based imaging of a reconstituted human preinitiation complex to define the mechanism underlying Pol II recruitment. These data revealed that the herpesviral TBP, encoded by ORF24 in KSHV, makes a direct protein-protein contact with the C-terminal domain of host RNA polymerase II (Pol II), which is a unique feature that functionally distinguishes viral from cellular TBP. The interaction is mediated by the N-terminal domain (NTD) of ORF24 through a conserved motif that is shared in its {beta}- and {gamma}-herpesvirus homologs. Thus, these herpesviruses employ an unprecedented strategy in eukaryotic transcription, wherein promoter recognition and polymerase recruitment are facilitated by a single transcriptional activator with functionally distinct domains. SIGNIFICANCE STATEMENTThe {beta}- and {gamma}-herpesviruses mediate their late gene transcription through a set of viral transcriptional activators (vTAs). One of these vTAs, ORF24 in Kaposis sarcoma-associated herpesvirus (KSHV), is a mimic of host TATA-box-binding protein (TBP). We demonstrate that the N-terminal domain of ORF24 and its homologs from other {beta}- and {gamma}-herpesviruses directly bind the unstructured C-terminal domain (CTD) of RNA Pol II. This functionally distinguishes the viral TBP mimic from cellular TBP, which does not bind Pol II. Thus, herpesviruses encode a transcription factor that has the dual ability to directly interact with promoter DNA and the polymerase, a property which is unique in eukaryotic transcription and is conceptually akin to prokaryotic transcription factors.

molecular biology↗