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Mazin, A. V.

Publications and source records attributed to Mazin, A. V..

3 recordsLinked to original sources

BRCA1 promotes homologous recombination through separable DNA and RAD51 binding activities within its disordered region.

The breast and ovarian tumor suppressor BRCA1 heterodimerizes with BARD1 to promote DNA double-strand break repair by homologous recombination (HR) and to protect stressed DNA replication forks against nuclease attack. The large, intrinsically disordered central region of BRCA1 harbors binding sites for DNA and multiple repair factors, but its lack of stable structure has hindered mechanistic dissection of these activities. Using biochemical mapping and NMR spectroscopy, we delineate the DNA binding and RAD51 interaction interfaces within this region and construct separation-of-function mutants that selectively ablate each activity. Both DNA binding and RAD51 interaction are required for BRCA1-BARD1 to promote RAD51-mediated DNA strand invasion, and DNA binding also contributes to BLM-DNA2 end resection. These findings provide mechanistic insights into how individual ligand binding activities within BRCA1 contribute to genome maintenance.

biochemistry↗

RAD52 and RPA act in a concert promoting inverse RNA strand exchange

Recent studies in eukaryotes have revealed an important role of RNA in DNA repair and identified the RAD52 protein as a central player in RNA-dependent repair of DNA. In vitro, RAD52 promotes inverse RNA strand exchange between dsDNA and homologous RNA. This reaction is strongly stimulated by the RAD52 partner, replication protein A (RPA). Here, using NMR and biochemical methods we investigated the mechanism of this stimulation. We identified two RPA-binding sites in the unstructured RAD52 C-terminal domain (CTD), which mediate interaction with RPA70 and RPA32 subunits. These interactions are critical for stimulation of inverse RNA strand exchange. Furthermore, we showed that stimulation of inverse RNA strand exchange requires formation of an RPA-RNA complex that strengthens the RPA-RAD52 interaction and serves to deliver RNA to the RAD52-dsDNA complex for strand exchange. These results elucidate the mechanism of novel inverse RNA strand exchange activity of RAD52 and the role of RAD52-RPA interaction in RNA-dependent DNA repair.

biochemistry↗

Replication protein A binds RNA and promotes R-loop formation

Replication protein A (RPA), a major eukaryotic ssDNA-binding protein, is essential for all metabolic processes that involve ssDNA including DNA replication, repair, and damage signaling. Surprisingly, we found here that RPA binds RNA in vitro with high affinity. Using native RIP method, we isolated RNA-RPA complexes from human cells. Furthermore, RPA promotes R-loop formation between RNA and homologous dsDNA. R-loops, the three-stranded nucleic acid structure consisting of an RNA-DNA hybrid and the displaced ssDNA strand, are common in human genome. R-loops may play an important role in transcription-coupled homologous recombination and DNA replication restart. We reconstituted the process of replication restart in vitro using RPA-generated R-loops and human DNA polymerases. These findings indicate that RPA may play a role in RNA metabolism and suggest a mechanism of genome maintenance that depends on RPA and RNA.

molecular biology↗