Biology subjects

Marchese, M.

Publications and source records attributed to Marchese, M..

3 recordsLinked to original sources

bioRxiv2026

1,3-1,6 β-glucans reduce aging hallmarks in multiple organs and rapidly induce mitochondrial biogenesis and autophagy via direct effect on the killifish brain and human neurons

The short-lived annual fish Nothobranchius furzeri (Nfu) is a powerful vertebrate model for aging research due to its rapid lifespan and accelerated development of age-associated phenotypes, including gliosis and lipofuscin accumulation. Here, we investigated the effects of dietary 1,3-1,6 {beta}-glucans (BGs), natural polysaccharides derived from Saccharomyces cerevisiae, on aging-related processes across multiple tissues, with particular focus on the brain. Chronic treatment with BG-fortified food reduced several hallmarks of aging in multiple organs. Mechanistically, BG treatment modulated pathways associated with autophagy, lysosomal function, protein oxidation, and inflammation. Both acute and chronic BG administration increased autophagic activity in the aging brain, although lipofuscin accumulation was not affected. To assess whether BGs act directly on neural tissue, we established an ex-vivo Nfu brain culture system that recapitulates the age-dependent decline in autophagy observed in vivo. In this model, acute BG treatment restored impaired autophagy and promoted mitochondrial and lysosomal biogenesis in aged brains. Proteomic analyses revealed increased mitochondrial respiration and modulation of V-ATPase components involved in autophagosome acidification. Depletion of microglia reduced but not eliminated this effect, suggesting direct action of BGs on neurons. To verify the validity of these findings in humans, we performed BG treatment in human iPSC-derived neurons under conditions of impaired autophagy and found an increase in survival. Together, these findings identify {beta}-glucans as modulators of autophagy, mitochondrial function, and inflammation, highlighting their potential to promote healthy aging.

neuroscience↗

bioRxiv2026

Translational lipidomics reveals BMP and its precursor LPG as biomarkers for CLN5 Batten disease

CLN5 Batten disease, caused by biallelic mutations in CLN5, is a rare, early-onset neurodegenerative lysosomal storage disorder that has no cure and lacks validated biomarkers, hindering accurate diagnosis and assessment of therapeutic response. We recently identified CLN5 as the synthase of bis(monoacylglycero)phosphate (BMP), an endolysosomal phospholipid crucial for lysosome function and lipid catabolism. This suggested BMP and its precursor lysophosphatidylglycerol (LPG) as clinically relevant biomarkers. It also prompted in vivo confirmation of CLN5 as the biologically relevant lysosomal BMP synthase. Here we show that murine and ovine disease models lacking CLN5 show significant and universal depletion of BMP and elevation of LPG across tissues and brain regions, consistent with the biochemical function of CLN5. Additionally, lysosomal lysates from murine models of CLN5 Batten disease lack the ability to synthesize BMP from its precursor LPG, establishing CLN5 as the main BMP synthase in vivo. Of importance, CLN5 patient-derived fibroblasts show BMP depletion and LPG elevation. Translating these results towards clinical utility, we demonstrate BMP and LPG to be accessible biomarkers for CLN5 Batten disease in both plasma and dried blood spots, enabling early diagnosis and patient screening.

cell biology↗

bioRxiv2025

Stereospecific GPG acylation by CLN8 drives BMP biosynthesis and its loss leads to Batten disease

Loss-of-function mutations in the endoplasmic reticulum membrane protein CLN8 cause Batten disease, a neurodegenerative lysosomal storage disorder1. Together with the lysosomal enzyme CLN5, CLN8 mediates the biosynthesis of bis(monoacylglycero)phosphate (BMP), a phospholipid essential for lysosomal function and distinguished by its unique S,S stereochemistry2,3. However, the role of CLN8 in BMP synthesis has remained unclear. Here we establish that CLN8 is a glycerophosphoglycerol (GPG) acyltransferase that catalyses the stereospecific acylation of S,S-GPG to produce S,S-lysophosphatidylglycerol (LPG), the CLN5 substrate in BMP synthesis. Using cryo-electron microscopy, we resolve structures of the CLN8 homodimer in apo and substrate-bound states at 2.7 [A] resolution, revealing the active site architecture and a ping-pong acyl transfer mechanism. Batten disease-causing missense mutations impair CLN8 enzymatic activity in vitro and reduce BMP levels in a Cln8R24G knock- in mouse, whereas the Cln8mnd mouse frameshift mutation causes complete loss of BMP in vivo. Exogenous S,S-LPG, but not the R,S stereoisomer, restored BMP synthesis in CLN8- deficient cells and mice, and improved neurological phenotypes in cln8 mutant zebrafish. Together, these findings define the enzymatic function of CLN8, elucidate the biochemical basis of CLN8 Batten disease, and establish a proof-of-concept for treating it through stereospecific BMP precursor supplementation.

biochemistry↗