Biology subjects

Manookin, M. B.

Publications and source records attributed to Manookin, M. B..

5 recordsLinked to original sources

bioRxiv2026

Designing stimuli for non-invasive, cell-type-specific manipulation of retinal ganglion cell activity

The retina encodes visual information through parallel pathways formed by distinct retinal ganglion (RGC) types. Current understanding of how each cell type contributes to downstream visual processing and perception is limited by a lack of tools for selectively manipulating the activities of individual RGC types. Here, we introduce a computational framework called STORM (SpatioTemporal Orthogonal Response Modulation) that creates visual stimuli that aim to selectively modulate the activities of specific RGC types while minimally affecting the activities of nearby RGCs of non-targeted types. To illustrate the approach, demonstrate its flexibility, and identify conditions under which each simulated RGC type could be selectively manipulated, we first applied this framework to simplified models of RGC function, such as Linear-Nonlinear-Poisson (LNP) and LN-LN cascade models. We also deployed this approach on more complex (and more accurate) models of RGC responses, based on convolutional neural networks. We demonstrate that differences in spatial receptive fields, temporal dynamics, response polarities, and nonlinearities can provide sufficient degrees of freedom for designing stimuli that selectively manipulate individual RGC types. We also generalize this approach to conditions where the receptive field locations are unknown for in vivo and clinical applications.

neuroscience↗

bioRxiv2021

Contribution of linear and nonlinear mechanisms to predictive motion estimation

Successful behavior relies on the ability to use information obtained from past experience to predict what is likely to occur in the future. A salient example of predictive encoding comes from the vertebrate retina, where neural circuits encode information that can be used to estimate the trajectory of a moving object. Predictive computations should be a general property of sensory systems, but the features needed to identify these computations across neural systems are not well understood. Here, we identify several properties of predictive computations in the primate retina that likely generalize across sensory systems. These features include calculating the derivative of incoming signals, sparse signal integration, and delayed response suppression. These findings provide a deeper understanding of how the brain carries out predictive computations and identify features that can be used to recognize these computations throughout the brain.

neuroscience↗

bioRxiv2020

Predictive encoding of motion begins in the primate retina

Survival in the natural environment often relies on an animals ability to quickly and accurately predict the trajectories of moving objects. Motion prediction is primarily understood in the context of translational motion, but the environment contains other types of behaviorally salient motion, such as that produced by approaching or receding objects. However, the neural mechanisms that detect and predictively encode these motion types remain unclear. Here, we address these questions in the macaque monkey retina. We report that four of the parallel output pathways in the primate retina encode predictive information about the future trajectory of moving objects. Predictive encoding occurs both for translational motion and for higher-order motion patterns found in natural vision. Further, predictive encoding of these motion types is nearly optimal with transmitted information approaching the theoretical limit imposed by the stimulus itself. These findings argue that natural selection has emphasized encoding of information that is relevant for anticipating future properties of the environment.

neuroscience↗

bioRxiv2018

Unusual physiological properties of two ganglion cell types in primate retina

The visual functions of the diverse retinal ganglion cell types in the primate retina, and the parallel visual pathways they initiate, remain poorly understood. Here, the unusual physiological and computational properties of the ON and OFF smooth monostratified (SM) ganglion cells are explored. Large-scale multi-electrode recordings from 48 macaque retinas revealed that these cells exhibited strikingly irregular receptive field structure composed of spatially segregated hotspots, quite different from the receptive fields of previously described retinal ganglion cell types. The ON and OFF SM cells are paired cell types, but OFF SM cells exhibited stronger hotspot structure than ON cells. Targeted visual stimulation and computational inference demonstrate strong nonlinear subunit properties of each hotspot that contributed to the signaling properties of SM cells. Analysis of shared inputs to neighboring SM cells indicated that each hotspot could not be explained by an individual presynaptic input. Surprisingly, visual stimulation of different hotspots produced subtly different spatiotemporal spike waveforms in the same SM cell, consistent with a dendritic contribution to hotspot structure. These findings point to a previously unreported nonlinear mechanism in the output of the primate retina that contributes to signaling spatial information.

neuroscience↗

bioRxiv2018

Neural sensitization improves encoding fidelity in the primate retina

An animals motion through the environment can induce large and frequent fluctuations in light intensity on the retina. These fluctuations pose a major challenge to neural circuits tasked with encoding visual information, as they can cause cells to adapt and lose sensitivity. Here, we report that sensitization, a short-term plasticity mechanism, solves this difficult computational problem by maintaining neuronal sensitivity in the face of these fluctuations. The numerically dominant output pathway in the macaque monkey retina, the midget (parvocellular-projecting) pathway, undergoes sensitization under specific conditions, including simulated eye movements. Sensitization is present in the excitatory synaptic inputs from midget bipolar cells and is mediated by presynaptic disinhibition from wide-field amacrine cells. Direct physiological recordings and a computational model indicate that sensitization in the midget pathway supports accurate sensory encoding and prevents a loss of responsiveness during dynamic visual processing.

neuroscience↗