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Madden, L.

Publications and source records attributed to Madden, L..

3 recordsLinked to original sources

Extracellular Vesicles-Mediated Crosstalk in Bone: miR-150-5p as a Mechanosensitive Inhibitor of Osteoclastogenesis

Bone is a dynamic tissue that is constantly remodelling via a tightly controlled balance between formation and resorption. However, when osteoclast-mediated resorption exceeds formation, it can lead to net bone loss and the development of osteoporosis. Osteoclastogenesis is regulated by local environmental cues, including paracrine factors released by resident cell populations. Extracellular vesicles (EVs) have recently emerged as key mediators of paracrine communication, though their role in osteoclastogenesis remains underexplored. Therefore, this study investigated how resident mesenchymal-derived bone cells and their secreted EVs modulate osteoclastogenesis, and delineate the signalling factors mediating this anti-catabolic communication. We demonstrate that the secretome of mesenchymal-derived bone cells inhibit osteoclast differentiation to differing degrees depending on the stage of lineage commitment and on the mechanical environment, and demonstrate that this inhibition is mediated via the release of EVs. In addition, we identified the terminally differentiated osteocyte as the optimal parent cell for the production of anti-catabolic EVs and demonstrated the importance EV dosage. Finally, we show that mechanosensitive miR-150-5p is packaged within osteocyte-derived EVs and inhibits osteoclast differentiation. Taken together, this study identifies mechanically-activated osteocyte derived EVs and miR-150-5p as key regulators of osteoclastogenesis and novel molecular therapies for skeletal pathologies.

bioengineering↗

The MicroMap is a network visualisation resource for microbiome metabolism

The human microbiome plays a crucial role in metabolism and thereby influences health and disease. Constraint-based reconstruction and analysis (COBRA) has proven an attractive framework to generate mechanism-derived hypotheses along the nutrition-host-microbiome-disease axis within the computational systems biology community. Unlike for human, no large-scale visualisation resource for microbiome metabolism has been available to date. To address this gap, we created the MicroMap, a manually curated microbiome metabolic network visualisation, which captures the metabolic content of over a quarter million microbial genome-scale metabolic reconstructions. The MicroMap contains 5,064 unique reactions and 3,499 unique metabolites, including for 98 drugs. The MicroMap allows users to intuitively explore microbiome metabolism, inspect microbial metabolic capabilities, and visualise computational modelling results. Further, the MicroMap shall serve as an educational tool to make microbiome metabolism accessible to broader audiences beyond computational modellers. For example, we utilised the MicroMap to generate a comprehensive collection of 257,429 visualisations, corresponding to the entire scope of our current microbiome reconstruction resources, to enable users to visually compare and contrast the metabolic capabilities for diaerent microbes. The MicroMap seamlessly integrates with the Virtual Metabolic Human (VMH, www.vmh.life) and the COBRA Toolbox (opencobra.github.io), and is freely accessible at the MicroMap dataverse (https://dataverse.harvard.edu/dataverse/micromap), in addition to all the generated reconstruction visualisations.

systems biology↗

Enterococcus faecalis Modulates Immune Activation And Slows Healing During Wound Infection

Enterococcus faecalis is one of most frequently isolated bacterial species in wounds yet little is known about its pathogenic mechanisms in this setting. Here, we used a mouse wound excisional model to characterize the infection dynamics of E. faecalis and show that infected wounds result in two different states depending on the initial inoculum. Low dose inocula were associated with short term, low titer colonization whereas high dose inocula were associated with acute bacterial replication and long term persistence. High dose infection and persistence were also associated with immune cell infiltration, despite suppression of some inflammatory cytokines and delayed wound healing. During high dose infection, the multiple peptide resistance factor (MprF) which is involved in resisting immune clearance, contributes to E. faecalis fitness. These results comprehensively describe a mouse model for investigating E. faecalis wound infection determinants, and suggest that both immune modulation and resistance contribute to persistent, non-healing wounds.

microbiology↗