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Lyabin, D. N.

Publications and source records attributed to Lyabin, D. N..

2 recordsLinked to original sources

New insight into the RNA-chaperon activity of nucleobindin 1

Nucleobindin 1 (NUCB1) is a multifunctional conserved protein located in Golgi luminal, nucleus, extracellular and cytosolic pools. NUCB1 is multidomain protein comprised of a signal peptide, a DNA-binding domain, a leucine zipper and Ca2+ -binding domain. The multiple domains and localization of NUCB1 potentiates its interactions with various partners, such as DNA, Gi3 protein, cyclooxygenase 2, LRP10 and RNA suggests its importance in the regulation of many cellular events. We revealed that NUCB1 contains three RNA-binding regions and able to interact with two RNA fragments. It was suggested possible variants of the participation of NUCB1 in the interaction of the two partially complementary RNAs. The RNA-binding properties of the NUCB1 were also confirmed in vivo experiments.

molecular biology↗

Transcript-wide m6A methylation defines the efficiency of the cap-independent translation initiation

N6-methyladenosine (m6A) role in translation control and, particularly, in cap-independent initiation has attracted major attention. A common approach is to study the impact of m6A depending on its particular location in the transcripts, but the global impact of m6A along mRNAs remains unclear. Here, we combined ribosome profiling under conditions of mTOR inhibition and m6A mapping to identify distinct subsets of mRNAs that differ in their sensitivity to the suppression of cap-dependent initiation. The sensitivity was strongly correlated with the total m6A methylation of the transcripts. Further, we demonstrated that upon decreased mTOR activity, m6A methylation facilitated the enhanced association of mRNAs with components of the eIF4F complex. Thus, the efficiency of cap-independent translation initiation is primarily defined not by precise localization but by the total level of m6A methylation, and m6A has a compensatory role in maintaining translation when the canonical cap-dependent pathway is impaired. All in all, our findings underscore the significance of contemplating global m6A methylation status as a pivotal element in translational control, particularly under stress or signaling perturbations. GRAPHICAL ABSTRACT O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=79 SRC="FIGDIR/small/690160v2_ufig1.gif" ALT="Figure 1"> View larger version (17K): org.highwire.dtl.DTLVardef@e18178org.highwire.dtl.DTLVardef@fb0346org.highwire.dtl.DTLVardef@19406eaorg.highwire.dtl.DTLVardef@1520821_HPS_FORMAT_FIGEXP M_FIG C_FIG

molecular biology↗