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Lopes, L.

Publications and source records attributed to Lopes, L..

3 recordsLinked to original sources

Trade-off between foraging and vigilance in the Red-legged Seriema

As foraging increases exposure to predators, individuals must allocate time to vigilance in addition to food acquisition. Although those behaviors are assumed to be mutually exclusive, this is often hard to disentangle, given that multiple sensory modalities are often applied. However, when foraging, animals often have one sensory modality more impaired (e.g. vision), than others (e.g. auditory); thus, a level of compromise on vigilance capabilities is assumed while foraging. Here, we test the idea that when a food item requires manipulation, thus reducing vigilance capabilities, social foraging should promote shared costs of vigilance. We conducted video recordings to investigate whether there is a trade-off between foraging and vigilance behavior in red-legged seriemas (Cariama cristata) when foraging in pairs. We studied the social foraging behavioral patterns while seriemas were feeding on macauba palm (Acrocomia aculeata) fruit, which requires a series of throwing maneuvers to crack the hard outer shell. Our results showed that within a pair recording one individual was observed to spend more time vigilant than their partner, while the other individual spent more time throwing fruit than their partner. However, we found no evidence for synchronization or coordination of vigilance and foraging between individuals within a feeding bout. These results provide insight into the foraging ecology of red-legged seriemas and the trade-off between foraging and vigilance in social contexts.

animal behavior and cognition↗

Development and assessment of a new multichannel electrocutaneous device for non-invasive somatosensory stimulation for magnetic resonance applications

Electrocutaneous stimulation (ES) relies on the application of an electrical current flowing through the surface of the skin, eliciting a tactile percept. It can be applied for somatosensory mapping approaches at functional magnetic resonance imaging (fMRI) to obtain somatotopic maps illustrating the spatial patterns reflecting the functional organization of the primary somatosensory cortex (S1). However, its accessibility remains constrained, particularly in applications requiring multiple stimulation channels. Furthermore, the magnetic resonance (MR) environment poses several limitations in this regard. This study presents a prototype of a multichannel electrocutaneous stimulation device designed for somatosensory stimulation of the upper limbs of human participants in an MR environment in an inexpensive, safe, customizable, controlled, reproducible, and automated way. Our current-controlled, voltage-limited, stimulation device comprises 20 stimulation channels that can be individually configured to deliver various non-simultaneous combinations of personalized electrical pulses, depending on the subject, stimulation site, and stimulation paradigm. It can deliver a predefined electrical stimulus during fMRI acquisition, synchronized with the stimulation task design and triggered upon initiation of the acquisition sequence. Regarding device assessment, we conducted tests using an electrical circuit equivalent to the impedance of the human body and the electrode-skin interface to validate its feasibility. Then, we evaluated user acceptability by testing the device in human participants. Considering the stringent conditions of the MR environment, we performed a comprehensive set of safety and compatibility evaluations using a phantom. Lastly, we acquired structural and functional MR data from a participant during a somatosensory stimulation experiment to validate brain activity elicited by electric stimulation with our device. These assessments confirmed the devices safety in fMRI studies and its ability to elicit brain activity in the expected brain areas. The scope of application of our device includes fMRI studies focused on somatosensory mapping and brain-computer interfaces related to somatosensory feedback.

neuroscience↗

A chromosome-scale assembly for dAnjou pear

Cultivated pear consists of several Pyrus species with P. communis (European pear) representing a large fraction of worldwide production. As a relatively recently domesticated crop and perennial tree, pear can benefit from genome-assisted breeding. Additionally, comparative genomics within Rosaceae promises greater understanding of evolution within this economically important family. Here, we generate a fully-phased chromosome-scale genome assembly of P. communis cv. dAnjou. Using PacBio HiFi and Dovetail Omni-C reads, the genome is resolved into the expected 17 chromosomes, with each haplotype totalling nearly 540 Megabases and a contig N50 of nearly 14 Mb. Both haplotypes are highly syntenic to each other, and to the Malus domestica Honeycrisp apple genome. Nearly 45,000 genes were annotated in each haplotype, over 90% of which have direct RNA-seq expression evidence. We detect signatures of the known whole-genome duplication shared between apple and pear, and we estimate 57% of dAnjou genes are retained in duplicate derived from this event. This genome highlights the value of generating phased diploid assemblies for recovering the full allelic complement in highly heterozygous crop species.

genomics↗