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Llabata, P.

Publications and source records attributed to Llabata, P..

2 recordsLinked to original sources

How the West(ern) Was Won: Solutions for Immunoblotting Large and Small Proteins

Relative protein quantification is a well-established technique in the vast majority of the molecular biology laboratories. However, western blot standard protocols may be unable to detect certain proteins depending on their size. When the protein of interest is out of 10-250 KDa range, its migration through the gel or transfer to the membrane are compromised, thus making its detection difficult. Here we present a set of modifications of the standard working procedure for western blotting based on the experience working with Small VCP Interacting Protein (SVIP) and Max-Gene Associated Protein (MGA), whose molecular weight are 8 and 350 kDa, respectively. We expect that these adaptations may help researchers to improve their experiments in a cost-effective manner.

molecular biology↗

SMARCA4 deficient tumours are vulnerable to KDM6A/UTX and KDM6B/JMJD3 blockade

Despite the genetic inactivation of SMARCA4, a core component of the SWI/SNF-complex commonly found in cancer, there are no therapies that effectively target SMARCA4-deficient tumours. Here, we show that, unlike the cells with activated MYC oncogene, cells with SMARCA4 inactivation are refractory to the histone deacetylase inhibitor, SAHA, leading to the aberrant accumulation of H3K27me3. This is associated with impaired transactivation and significantly reduced levels of the histone demethylases KDM6A/UTX and KDM6B/JMJD3, which confer a strong dependency on the KDM6s in the SMARCA4-mutant cells, so that its inhibition compromises cell viability. Administering the KDM6 inhibitor GSK-J4 to mice orthotopically implanted with SMARCA4-mutant lung cancer cells or primary small cell carcinoma of the hypercalcaemic type (SCCOHT) had strong anti-tumour effects. Our results highlight the vulnerability of KDM6 inhibitors as a characteristic that could be exploited for treating SMARCA4-mutant cancer patients.

cancer biology↗