Biology subjects

Lindstedt, C.

Publications and source records attributed to Lindstedt, C..

7 recordsLinked to original sources

bioRxiv2026

A near chromosome-scale genome assembly of the Common pine sawfly (Diprion pini, Linnaeus, 1758)

The common pine sawfly, Diprion pini, is a widespread defoliator of pine forests across Europe and Asia, with outbreaks causing substantial ecological and economic damages. However, genomic resources for this species have been limited, hindering advances in molecular ecology or pest management. Here, we present a near chromosome-level reference genome for D.pini, generated using PacBio HiFi reads, Oxford Nanopore MionION long reads, and 10x Genomics linked reads. The final assembly is organized into mostly chromosome-sized scaffolds. It spans a length of 268 Mb, comprises 81 scaffolds, and has a scaffold N50 of 18.7 Mb. BUSCO analysis (hymenoptera_odb10) indicates a high genome completeness of 97.2%. With 22,7 kb the mitochondrial genome is unusually large due to an extended non-coding control region (6,874 bp). Gene prediction identified 26,335 protein-coding genes, of which 12,769 were functionally annotated. Comparative analyses with other sawflies and Apocrita identified 2,472 proteins unique to D. pini, some of which are putatively associated with the processing of plant secondary metabolites. Notably, our genome assembly highlights that, when a closely related, high-quality reference genome is available, chromosome-scale assemblies can be generated without the need of Hi-C sequencing. The genome provides a valuable foundation for the development of improved monitoring and management strategies for D. pini outbreaks and contributes to advancing fundamental research on Hymenoptera evolution.

genomics↗

bioRxiv2025

Group size dependent selection for cooperation versus freeloading in collective chemical defence

Individuals can cooperate in groups to achieve greater fitness, but the contribution of each individual to the collective good may depend on group size and on strategies employed by other members. How environmental contexts influence selection for cooperation is currently poorly understood and lacks experimental evidence from systems exhibiting behavioural plasticity in collective acts. This study investigates group size dependent selection on collective chemical defence in a gregarious pine sawfly (Neodiprion sertifer). Larvae perform chemical defence by secreting a costly deterrent fluid while adopting a U-posture. By manipulating group size and the individuals ability to deploy the defensive fluid for the collective good, we show that survival against predation is higher in cooperative groups and that the benefits gained via collective defence are more pronounced in smaller groups. As predicted by theory, individuals participate less in collective defence in larger groups than in smaller ones. This lower contribution is not attributed to higher life-history costs from increased resource competition. Altogether, these results suggest that selection for cooperation in public goods is group size dependent, promoting cooperation in smaller groups whereas the relative fitness of freeloaders is higher in larger groups.

evolutionary biology↗

bioRxiv2025

Direct and indirect benefits of cooperation in collective defense against predation

The evolution and maintenance of public goods cooperation, despite cheating, remains a key interest in social biology. Identifying how ecological factors determine the direct and indirect benefits that maintain cooperation has proven challenging, as these can vary significantly across species and environments. Here, we study this problem using the social pine sawfly Neodiprion sertifer (Hymenoptera) as a model system. During their larval stage, N. sertifer live in groups and collectively secrete a defensive fluid against predators. This behavior comprises a public good as it is costly to exhibit and beneficial to others, and individuals vary in their contribution to group defense. We experimentally manipulated individual contributions to defense to assess how these influence survival under natural insect predation. Our results indicate that defense has a group-level benefit as individuals were more likely to survive in cooperative groups with a higher proportion of defending larvae. Moreover, being able to deploy defensive fluid confers direct survival benefits. Genetic and phenotypic analyses of natural populations further show that kin selection promotes collective defense, as groups of larvae are often composed of full siblings. We also find that the contribution to defense is female-biased and diminishes in larger, more male-biased groups, and to some extent with decreased kinship, indicating that individuals adjust their contributions based on social context. Overall, we find that contribution to the collective defense provides both direct and indirect benefits and that individuals regulate their contributions mainly based on the social environment, resulting in variation within and among natural populations. Significance statementIndividuals in groups can cooperate to achieve shared goals, but they face an evolutionary challenge: if the benefits of cooperation are shared equally, freeloaders receive the same benefits as others while contributing less. Although theoretical solutions to this problem are abundant, we still lack empirical evidence on how those mechanisms function in natural systems. We study this with pine sawfly larvae, which defend collectively against predators. We show that while cooperation increases the survival of individuals and their relatives, they adjust their contributions based on who and how many they are surrounded by, relying more on freeloading in larger and male-biased groups. This results in variation in cooperativeness but prevents freeloaders from taking over.

evolutionary biology↗

bioRxiv2020

The impact of life stage and pigment source on the evolution of novel warning signal traits

Our understanding of how novel color traits evolve in aposematic taxa is based largely on studies of reproductive stages and organisms with endogenously produced pigmentation. In these systems, genetic drift is often required for novel alleles to overcome strong purifying selection stemming from frequency-dependent predation and positive assortative mating. Here we show that the importance of these mechanisms can differ if selective processes are considered in larval stage instead. By integrating population genomic data, predation experiments and phenotypic measurements of larvae and their host plants, we show that novel white alleles in Neodiprion lecontei (pine sawfly) larvae spread via selection rather than drift. The cost of being rare was not offset by an enhanced aposematic display or immune function. Instead, bottom-up selection via host plants may drive divergence among populations as white larvae were disproportionately abundant on a pine species with a reduced carotenoid content relative to other pine hosts.

evolutionary biology↗

bioRxiv2020

Sex ratio and sexual conflict in a collective action problem

The maintenance of cooperation is difficult whenever collective action problems are vulnerable to freeriding (reaping the benefits without contributing to the maintenance of the good). We identify a novel factor that can make a system tolerate an extent of freeriding. If a population consists of discrete types with demographically distinct roles, such that the success of one type does not imply it can spread to replace other types in the population, then collective goods may persist in the presence of free-riders because they are necessarily kept in a minority role. Biased sex ratios (e.g. in haplodiploids) create conditions where individuals of one sex are a minority. We show that this can make the less common sex contribute less to a public good in a setting where the relevant life-history stage -- larval group defence against predators -- does not feature any current breeding opportunities that might lead to confounding reasons behind sex-specific behaviour. We test our model with haplodiploid pine sawfly larvae, showing that female larvae are the main contributors to building the antipredator defence against predators. Significance statementIndividuals in groups can cooperate to achieve something together, but with an evolutionary difficulty: if benefits of cooperation are shared equally among all, freeriders get the same benefit as others while paying less for it. We propose a novel reason why freeriding does not automatically spread until the collectively beneficial outcome is destroyed: sometimes groups consist of individuals of distinct categories, limiting freerider spread. If, for example, there are always fewer males than females, then even if every male becomes a freerider, the whole group still survives simply because not everyone can be male. Pine sawfly larvae defend against predators by regurgitating sticky fluids, but females contribute more to this common defence, and we show this example fits our model.

evolutionary biology↗

bioRxiv2019

Parental care shapes evolution of aposematism and provides lifelong protection against predators

Social interactions within species can modulate the response to selection and determine the extent of evolutionary change. Yet relatively little work has determined whether the social environment can influence the evolution of traits that are selected by interactions with other species - a major source of natural selection. Here we show that the amount of parental care received as an offspring can influence the expression, and potential evolution, of warning displays deployed against predators in adulthood. In theory, warning displays by prey are selected by predators for uniformity and to reliably advertise the extent to which individuals are chemically defended. However, the correlated evolution of intensity of the visual display and strength of the chemical defense is only possible if there is a genetic correlation between them. Adult burying beetles Nicrophorus vespilloides bear bright orange elytral markings which advertise their chemical defenses. We experimentally manipulated the level of maternal care that individuals received when they were larvae and then measured the strength of the correlation between the component parts of the warning display when they reached adulthood. We found that under limited care individuals were smaller and produced less conspicuous warning displays. The underlying family (genetic) correlation between the visual display and the chemical defense was weaker in individuals that received little care as larvae. We conclude that parenting by burying beetles modulates the evolvability of aposematic defense, making correlated evolutionary change in signal intensity and chemical defense less likely when they restrict care to their young.\n\nSignificance StatementParental care can improve early offspring survival against predators. However, we have little knowledge of how its effects shape the evolution of predator-prey interactions later in the offsprings life. We tested this with carrion beetles who provide care for offspring and who carry warning coloration to advertise to predators that they are chemically defended. We show that more parental care resulted in larger, more brightly coloured and chemically defended adult beetles. Furthermore, when parents had provided little care for their young we found weaker genetic correlations between warning signal salience and chemical defense. Over time, this could result in untrustworthy warning signals, which could render them ineffective against predators.

evolutionary biology↗

bioRxiv2017

Genetic architectures of larval pigmentation and color pattern in the redheaded pine sawfly (Neodiprion lecontei)

Pigmentation has emerged as a premier model for understanding the genetic basis of phenotypic evolution, and a growing catalog of color loci is starting to reveal biases in the mutations, genes, and genetic architectures underlying color variation in the wild. However, existing studies have sampled a limited subset of taxa, color traits, and developmental stages. To expand our sample of color loci, we performed quantitative trait locus (QTL) mapping analyses on two types of larval pigmentation traits that vary among populations of the redheaded pine sawfly (Neodiprion lecontei): carotenoid-based yellow body color and melanin-based spotting pattern. For both traits, our QTL models explained a substantial proportion of phenotypic variation and suggested a genetic architecture that is neither monogenic nor highly polygenic. Additionally, we used our linkage map to anchor the current N. lecontei genome assembly. With these data, we identified promising candidate genes underlying: (1) a loss of yellow pigmentation in Mid-Atlantic/northeastern populations (Cameo2 and apoLTP-II/I), and (2) a pronounced reduction in black spotting in Great-Lakes populations (yellow, TH, Dat). Several of these genes also contribute to color variation in other wild and domesticated taxa. Overall, our findings are consistent with the hypothesis that predictable genes of large-effect contribute to color evolution in nature.

genetics↗