Biology subjects

Levi, K.

Publications and source records attributed to Levi, K..

4 recordsLinked to original sources

bioRxiv2026

An Integrative Taste Receptor Links pH and Amino Acids to Sugar Sensing in Bemisia tabaci

Phloem-feeding insects execute complex behavioral decisions to secure essential nutrients from a diet characterized by nitrogen scarcity and severe osmotic pressure due to high sucrose concentrations. We investigated the sensory mechanisms underlying these decisions in the phloem-feeding whitefly Bemisia tabaci. We demonstrate that the sweet taste receptor BtabGR1, expressed in mouthpart and gut tissues, integrates three environmental chemical cues: sucrose concentration, the presence of the essential amino acid arginine, and pH values. Arginine is a pH-dependent positive modulator of sucrose sensing, increasing receptor responses nearly fourfold under apoplast-like conditions and more than doubling the receptor responses in the gut luminal environment. Insects show a strong feeding preference for arginine-containing diets in dual-choice bioassays, with markedly higher intake when arginine is present. RNAi-mediated silencing of BtabGR1 disrupt intake regulation, leading to increased honeydew excretion. These findings suggest a putative link between arginine and the BtabGR1 receptor in regulating both feeding-site evaluation and diet ingestion. Furthermore, the ability to integrate three distinct environmental cues makes BtabGR1 one of the most complex interdependent sensory systems described for a single insect chemoreceptor.

physiology↗

bioRxiv2019

A Distinct Contractile Injection System Found in a Majority of Adult Human Microbiomes

An imbalance of normal bacterial groups such as Bacteroidales within the human gut is correlated with diseases like obesity. A current grand challenge in the microbiome field is to identify factors produced by normal microbiome bacteria that cause these observed health and disease correlations. While identifying factors like a bacterial injection system could provide a missing explanation for why Bacteroidales correlates with host health, no such factor has been identified to date. The lack of knowledge about these factors is a significant barrier to improving therapies like fecal transplants that promote a healthy microbiome. Here we show that a previously ill-defined Contractile Injection System is carried in the gut microbiome of 99% of individuals from the United States and Europe. This type of Contractile Injection System, we name here Bacteroidales Injection System (BIS), is related to the contractile tails of bacteriophage (viruses of bacteria) and have been described to mediate interactions between bacteria and diverse eukaryotes like amoeba, insects and tubeworms. Our findings that BIS are ubiquitous within adult human microbiomes suggest that they shape host health by mediating interactions between Bacteroidales bacteria and the human host or its microbiome.

microbiology↗

bioRxiv2019

Gateway mechanism confers ultrasensitivity on motor’s function

Biological switches are wide spread in many biological systems. Among them, the switch of the bacterial flagellar motor has generated much interest because it affects a mechanical process rather than a chemical reaction, it controls the direction of rotation of a rotary motor rather than being an on/off switch, and it is exceptionally ultrasensitive. Yet, the molecular mechanism underlying its function has remained unknown. Here we resolved unique features of this mechanism: On the one hand, it is tightly regulated by multiple means, involving three binding sites and two different covalent modifications, with the binding specificity being dictated by the type of covalent modification and by a strict binding sequence. On the other hand, it endows the motor with flexibility as it involves an intermediate stage of brief switches that provides a "go/no go" situation, in which the motor can either proceed to a stable rotation in the new direction or shift back to the original direction. This intermediate stage appears to be a means of the cell to produce angular deflection of swimming while maintaining directional persistence. Furthermore, we show by mathematical modeling that such a switching mechanism can provide ultrasensitivity. This unique combination of tight regulation, flexibility, and ultrasensitivity makes this switching mechanism of special interest.

microbiology↗

bioRxiv2019

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Microbiomes are vast communities of microbes and viruses that populate all natural ecosystems. Viruses have been considered the most variable component of microbiomes, as supported by virome surveys and examples of high genomic mosaicism. However, recent evidence suggests that the human gut virome is remarkably stable compared to other environments. Here we investigate the origin, evolution, and epidemiology of crAssphage, a widespread human gut virus. Through a global collaboratory, we obtained DNA sequences of crAssphage from over one-third of the worlds countries, and showed that its phylogeography is locally clustered within countries, cities, and individuals. We also found colinear crAssphage-like genomes in both Old-World and New-World primates, challenging genomic mosaicism and suggesting that the association of crAssphage with primates may be millions of years old. We conclude that crAssphage is a benign globetrotter virus that may have co-evolved with the human lineage and an integral part of the normal human gut virome.

microbiology↗