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Biology subjects

Lau, S. C. Y.

Publications and source records attributed to Lau, S. C. Y..

3 recordsLinked to original sources

Millennial-scale societal shifts drive the widespread loss of a marine ecosystem

Degradation of marine ecosystems by human activities is a global problem, with only recent recognition that exploitation of ecosystems over millennia can result in their functional extinction and loss from human memory. To reconstruct the historical distribution of oyster reefs in China, and the context behind loss, we extracted information from archaeological records and historical documents (pre-modern Chinese literature, administration reports, art, maps, newspapers) spanning [~]7600 years, then constrained records with past coastlines and habitable environmental conditions. Oyster reefs were extensively distributed along >750 km of coastline in the Pearl River Delta, and their exploitation underpinned the regions development into Chinas first economic hub in the 6th century. Millennial-scale overexploitation alongside societal shifts were central in their regional extirpation by the 19th century, but the enduring cultural importance of oysters is maintained by aquaculture expansion. Informed conservation practices can be developed from reconstructing the temporal interplay between human societies and the natural environment.

ecology↗

Chromosome-scale genome assembly the tropical abalone (Haliotis asinina)

Abalone (family Haliotidae) are an ecologically and economically significant group of marine gastropods that can be found in tropical and temperate waters. To date, only a few Haliotis genomes are available, all belonging to temperate species. Here, we provide the first reference genome of the tropical abalone Haliotis asinina. The combination of PacBio long-read HiFi sequencing and Dovetails Omni-C sequencing allowed the chromosome-level assembly of this genome, while PacBio Isoform sequencing across five tissue types enabled the construction of high-quality gene models. This assembly resulted in 16 pseudo-chromosomes spanning over 1.12 Gb (98.1% of total scaffolds length), N50 of 67.09 Mb, the longest scaffold length of 105.96 Mb, and a BUSCO completeness score of 97.6%. This study identified 25,422 protein-coding genes and 61,149 transcripts. In an era of climate change and ocean warming, this genome of a heat-tolerant species can be used for comparative genomics with a focus on thermal resistance. This high-quality reference genome of H. asinina is a valuable resource for aquaculture, fisheries, and ecological studies.

genomics↗

Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial Period

The marine-based West Antarctic Ice Sheet (WAIS) is considered vulnerable to irreversible collapse under future climate trajectories and its tipping point may even lie within the mitigated warming scenarios of 1.5-2 {degrees}C of the United Nations Paris Agreement. Knowledge of ice loss during similarly warm past climates, including the Last Interglacial, when global sea levels were 5-10 m higher than today, and global average temperatures of 0.5-1.5 {degrees}C warmer than preindustrial levels, could resolve this uncertainty. Here we show, using a panel of genome-wide, single nucleotide polymorphisms of a circum-Antarctic octopus, persistent, historic signals of gene flow only possible with complete WAIS collapse. Our results provide the first empirical evidence that the tipping point of WAIS loss could be reached even under stringent climate mitigation scenarios. One-Sentence SummaryHistorical gene flow in marine animals indicate the West Antarctic Ice Sheet collapsed during the Last Interglacial.

evolutionary biology↗